Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso3g1589 | ATGGCGTCAAGACAGCAATTCAAGGAAGACAGAGCCGAGGCAGCTGCAAAACTCGCAGCGAAAGACATCGGCGACATCAACAGAACAAACGAGCGCGACGAGGGGTACGACTTGCACGACGAAGCCAACTTCAAGCAAGCACGAGCTGAAGCAGCTGCAAAGCTGGCGGCCAAGGATCTGGAGGACGCTAACAGATTAAGAGACAACACTTTCAACACATGGAAAGAGCAACATCAGCATGATGAGAACAAACCCGGTGTGATAGGGTCCATGTTTAGAGCCGCCAAGGAAGCCGTGGTTGGGAAGCCTCACCACGAGGAAGTTTATGCAAAGGAAACAAAGATGGGTGAATATTCAGATTATGCGACTCAGAAGGCGAGGGAAACGAAGCAGAAGGCTGGGGAGTATACAGACTATGCGGCTCAGAAAGCAAAAGAAACCAAAGACTATGCTGCTGAGAAGGCTAAGAATGCTAAAGATACCACTGTGCAGAAAGCTGGAGAGTACAAGGATTATACCGCTGAGAAGGCTAAGAATGCTAAAGATACCACTGTACAGAAAGCTGGAGAATACAAGGATTATACCGCTGAGAAGGCAATTGAAGGGAAGGACAGTGCAGTGGGGAAGCTTGGGGAGCTAAAGGAATCTGCTGCTGATGCTGCTAAAAGGGCTATGGGTTTCTTCACCGGTGGCAACAAAGACCAAACTAGAGAGGAGGAGGAGGAAACGAGGCGGAGTATGCAGGAGGTGAGGGTGCAAGATAAGGAGTATGGAACGGGACGTGGTACTGGAGAGAAGTTGGTGATAAAAATGGAAGAGTCGCGGCCAGGAGCGGTGGCGGATGCGCTCAAAGCAGCGAATAGGGCCATGGACGGCGATATGGAGGAGGAAGGCGTGCTTCATGTGGAGCGTCGTAGGGAGAAAATGTGA | 930 | 0.5065 | MASRQQFKEDRAEAAAKLAAKDIGDINRTNERDEGYDLHDEANFKQARAEAAAKLAAKDLEDANRLRDNTFNTWKEQHQHDENKPGVIGSMFRAAKEAVVGKPHHEEVYAKETKMGEYSDYATQKARETKQKAGEYTDYAAQKAKETKDYAAEKAKNAKDTTVQKAGEYKDYTAEKAKNAKDTTVQKAGEYKDYTAEKAIEGKDSAVGKLGELKESAADAAKRAMGFFTGGNKDQTREEEEETRRSMQEVRVQDKEYGTGRGTGEKLVIKMEESRPGAVADALKAANRAMDGDMEEEGVLHVERRREKM* | 310 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso3g1589 | 309 | PANTHER | EMBRYONIC PROTEIN DC-8-LIKE | 43 | 114 | - | - | |
| Gso3g1589 | 309 | PANTHER | EMBRYONIC PROTEIN DC-8-LIKE | 113 | 272 | - | - | |
| Gso3g1589 | 309 | PANTHER | EMBRYONIC PROTEIN DC-8-LIKE | 1 | 38 | - | - | |
| Gso3g1589 | 309 | PANTHER | DAUER UP-REGULATED-RELATED | 43 | 114 | - | - | |
| Gso3g1589 | 309 | PANTHER | DAUER UP-REGULATED-RELATED | 1 | 38 | - | - | |
| Gso3g1589 | 309 | PANTHER | DAUER UP-REGULATED-RELATED | 113 | 272 | - | - | |
| Gso3g1589 | 309 | Pfam | Late embryogenesis abundant protein | 170 | 213 | IPR004238 | - | |
| Gso3g1589 | 309 | Pfam | Late embryogenesis abundant protein | 129 | 158 | IPR004238 | - | |
| Gso3g1589 | 309 | Pfam | Late embryogenesis abundant protein | 148 | 191 | IPR004238 | - | |
| Gso3g1589 | 309 | Gene3D | - | 168 | 230 | - | - | |
| Gso3g1589 | 309 | Coils | Coil | 233 | 253 | - | - | |
| Gso3g1589 | 309 | MobiDBLite | consensus disorder prediction | 233 | 267 | - | - | |
| Gso3g1589 | 309 | MobiDBLite | consensus disorder prediction | 224 | 267 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso3g1589 | Gso-Chr3 | 41827798 | 41829177 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso3g1589 | - | - | gmx:547500 | 570.081 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso3g1589 | 3 | 41827798 | 41829177 | Gso3g1589 | 3 | 41827798 | 41829177 | ECH | |
| Gso19g1570 | 19 | 44637386 | 44638479 | Gso3g1589 | 3 | 41827798 | 41829177 | GST | |
| Gso3g1589 | 3 | 41827798 | 41829177 | Gso10g0556 | 10 | 6251058 | 6253183 | PCT | |
| Gso10g0556 | 10 | 6251058 | 6253183 | Gso3g1589 | 3 | 41827798 | 41829177 | PCT |