Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1583 ATGGGAAAGAGTAGCGGAAGAGACCGAAGACGAAGAAGATCACATGACTCTGAATCCGACTCACCTTCCGATTCCGACTCCGACAGACGCCACCGTAGCAATAGTCGCCGGTCGCGGCGGGACTCCGATGGCGACAGGAAGAAGAAGTCCTCGAAGTCTGAATCCGAGTCGCCTTCCGATTCCGACTCCGACATACGCCACCGTAGTAGCAGCCGCCGGTCGTGGCGGGACTCCGACGGCGATAGGAAGAAGTCCTCGAGGAGCATCACAGAAGAGGAAATTACAAAGTACATGGCCAGAAAGGCCCAATCGAAGGCAATGAAAGTAGCGAAAAAGTTGAAAACCAGTACGGTATCGGGCTATTCCAACGATTCGAATCCGTTTGGTGACTCTAATCTCAACGAGAAGTTTGTCTGGCGCAAGAAGATTGAGCGCGATGTTTCACAAGGTGTGTCTATTGATGCGTTTTCAATGAAGGCAGAGAAAAAGAAACAGAGAGAAAGGATGGCAGAAATTGAAAAAGTAAAAAAGAGAAGAGAGGAAAGGGCACTTGAGAAAGCAAGGCACGAGGAAGAAATGGCACTGTTAGCCAGAGAGCGTGCTCGAGCTGAGTTTCAGGACTGGGAAAAAAAAGAAGAGGAGTTTCATTTTGATCAAAGCAAAGTTAGGTCAGAAATTAGATTGCGTGAAGGGCGTGCCAGACCCATCGATGTCCTAACCAAGCATCTCAATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATACATGGTCTTCAAGGGTTTGACTGTGAACGAAATGAGTGAGCTACGTGACGACATCAAAATGCATCTAGACCTTGACAGGGCAACACCTACTCATGTAGAATATTGGGAGGCACTCCTTCTGGTTTGTGATTGGGAGCTAGCTGAAGCTCAAAGAAAGGATGCACTTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCTGCTGAGCTGCTTGCAGAAGAAAGGGGTCTGCATTCCAGTGTTGAGCCAGATGTGAAGAGGCTTTTGCAGGGGAAGACACTTGCAGAGTTGGAGGCTTTACGGGTTCACATTGAATCAGAAATGCGTACTGGTACAGCAAAGGTGGTTGAGTACTGGGAGGCCATTTTAAAACATCTCCACATTTATAAGGCCAAGGCTTGTTTAAAGGAAATTCATGCTAAATTGCTACGTAAGCATTTGCAATCTCTTGAGAGACCATTGGAGGATGAAGATAAATTGGAGAATGCTCATGTTATGATACCTGAGGAGGAAGATACTGAAGATGATATTAAAGTCCAATCTGCAGATGAATCATTCTCACCAGAGCCCATTAGAGAGGATCAAGAAGCTGATGATGAGGCTGGATCATTTTCACCACAACTGTTGCACGGTGATGAAAATGCGGAAGCTATTGACCCAGAAGAAGATAGAGCCATGCTGGAGCGGAATCGTAAGGCTGTATTAGAAGAGCAGCAAAGACGAGTTCAGGAAGCAATGGCATCAAAGCCAACTCCTTCTGAAGATCATTTTGAGATGAAGGCCTTAAAAGCTATGGGGGATATGGAAGATGGAGACTCTGTGTTTGGATCTGGTGCTGAAGTGAATCTGGATTCCCAGGTTTATTGGTGGCATGACAAATACAGGCCTAGGAAGCCGAAGTATTTCAACCGTGTTCACACTGGATATGAGTGGAACAAATATAATCAGACTCACTATGATCATGACAACCCACCTCCAAAGATAGTCCAAGGGTACAAATTTAATATTTTCTACCCTGATCTTGTAGACAAGACAAAAGCCCCAACCTACACCATTGAGAAGGATGGCAGCAATGGGGAGACTTGCATTATAAGATTCCATGCAGGGCCACCATATGAAGACATAGCTTTCCGCATTGTTAACAAAGAATGGGAGTATTCTCATAAGAAAGGTTTTAAGTGTGCATTTGAACGTGGAATTCTGCATGTGTACTTCAATTTCAAACGCCACCGCTACCGAAGATAA 2013 0.455 MGKSSGRDRRRRRSHDSESDSPSDSDSDRRHRSNSRRSRRDSDGDRKKKSSKSESESPSDSDSDIRHRSSSRRSWRDSDGDRKKSSRSITEEEITKYMARKAQSKAMKVAKKLKTSTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSQGVSIDAFSMKAEKKKQRERMAEIEKVKKRREERALEKARHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVNEMSELRDDIKMHLDLDRATPTHVEYWEALLLVCDWELAEAQRKDALDRARVRGEEPPAELLAEERGLHSSVEPDVKRLLQGKTLAELEALRVHIESEMRTGTAKVVEYWEAILKHLHIYKAKACLKEIHAKLLRKHLQSLERPLEDEDKLENAHVMIPEEEDTEDDIKVQSADESFSPEPIREDQEADDEAGSFSPQLLHGDENAEAIDPEEDRAMLERNRKAVLEEQQRRVQEAMASKPTPSEDHFEMKALKAMGDMEDGDSVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCAFERGILHVYFNFKRHRYRR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1583 670 Pfam Conserved mid region of cactin 198 395 IPR018816 -
Gso3g1583 670 MobiDBLite consensus disorder prediction 11 93 - -
Gso3g1583 670 MobiDBLite consensus disorder prediction 408 423 - -
Gso3g1583 670 Coils Coil 162 206 - -
Gso3g1583 670 PANTHER BNAC05G02180D PROTEIN 2 670 - -
Gso3g1583 670 MobiDBLite consensus disorder prediction 408 476 - -
Gso3g1583 670 SMART CactinC_cactus_3 546 670 - -
Gso3g1583 670 MobiDBLite consensus disorder prediction 1 93 - -
Gso3g1583 670 Pfam Cactus-binding C-terminus of cactin protein 546 670 IPR019134 GO:0005515
Gso3g1583 670 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 2 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1583 Gso-Chr3 41774085 41780135 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1583 K25058 - gmx:100805202 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1583 3 41774085 41780135 Gso3g1583 3 41774085 41780135 ECH
Gso19g1564 19 44586865 44592922 Gso3g1583 3 41774085 41780135 GST