Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1564 ATGGGGAAGAGTAGCGGAAGAGACCGAAGACGAAGAAGGTCAGATGACTCTGAATCCGAATCACCTTCGGATTCTGACTCCGACAGACGCCGCGGTAGCAGTAGTCGCCGCTCGCGGCGGGACTCCGACGGCGACAGGAAGAAGAAGTCCACGAAGTCTGAATCCGAGTCACATTCCGATTCCGACTCCGACTCCGACAGACGCCACCGTAGCAGCAGCCGCCGGCCTCGGCGGGACTCTGACGGCGATAGGAAGAAGAAGTCCTCGAGGAGCATCACAGAAGAGGAAATTACGCAGTACATGACCAAAAAGGCCCAATCGAAGGCAATGAAAGTCGCAAAAAAGTTGAAAACCAGTACGGTGTCGGGCTATTCCAACGATTCGAATCCGTTTGGTGACTCCAATCTCAACGAGAAGTTTGTTTGGCGGAAGAAGATTGAGCGCGATGTTTCACAAGGTGTGTCTATTGAAGCGTTTTCAAAGAAGGCAGAGAAAAAGAAACAGAGAGAAAGGATGGCAGAAATTGAAAAAGTAAAAAAGAGAAGAGAGGAAAGGGCACTTGAGAAAGCACGACACGAGGAAGAAATGGCACTGTTAGCTAGAGAGCGTGCTCGAGCTGAGTTTCAGGACTGGGAAAAAAAAGAAGAGGAGTTTCATTTTGATCAAAGCAAAGTTAGGTCAGAAATTAGATTGCGTGAAGGGCGTGCCAGACCAATTGATGTCCTAACCAAGCATCTCAATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATACATGGTTTTCAAGGGTTTGACTGTGAACGAAATGAGTGAGCTACGTGACGACATCAAAATGCATCTAGACCTTGACAGGGCAACACCAACTCATGTAGAATATTGGGAGGCACTCCTTCTGGTATGTGATTGGGAGCTAGCTGAAGCCCAAAGAAAGGATGCACTTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCTGCTGAGCTGCTTGCAGAAGAAAGGGGTCTGCATTCCAGTGTTGAGCCAGATGTGAAGAAGCTTTTGCAGGGGAAGACACATGCAGAGTTGGAGGCTTTACGGGTTCACATTGAATCAGAAATGCGTACTGGTACAGCAAAGGTGGTTGAGTACTGGGAGGCCATTTTAAAACATCTCCACATTTATAAGGCCAAGGCTTGTTTAAAGGAAATTCATGCTAAATTGCTACGTAAGCATTTGCAATCTCTTGAGAGACCATTGGAGGATGAAGATAAATTAGAGAATGCTCATGTTATGGTACCTGAGGAGGAAGATACTGAGGATGATATTAAAGTCCGATCTGCAGATGAATCATTCTCACCAGAGCCCATTAGAGAGGATCAAGAAGCTGATGATGAGGCTGGATCATTTTCACCACAATTGTTGCACAGTGATGAAAATGAGGAAGCTATTGACCCAGAAGAAGATAGAGCTATGCTGGAGCGGAATCGTAAGGCTGTATTAGAAGAGCAGCAAAGACGAGTTCAGGAAGCAATGGCATCAAAGCCAGCTCCTTCTGAAGATAATTTTGAGATGAAGGCCTTAAAAGCTATGGGGGATATGGAAGATGGAGATTCTGTGTTTGGATCTGGTGCTGAAGTTAACCTGGATTCCCAGGTTTATTGGTGGCATGACAAATACAGACCTAGGAAGCCGAAGTATTTCAACCGTGTTCACACTGGATATGAGTGGAACAAATATAATCAGACTCACTATGATCATGACAACCCACCTCCAAAGATTGTCCAAGGTTACAAATTTAATATTTTCTATCCTGATCTTGTAGACAAGACAAAAGCTCCAACCTACACCATTGAGAAGGATGGCAGCAACGGGGAGACTTGCATTATAAGATTCCATGCTGGGCCACCATACGAAGACATAGCTTTCCGGATCGTTAACAAAGAATGGGAATATTCTCATAAGAAAGGTTTTAAGTGTACATTTGAACGTGGAATTCTGCACGTGTACTTCAATTTCAAACGCCATCGCTACCGAAGATAA 2022 0.4525 MGKSSGRDRRRRRSDDSESESPSDSDSDRRRGSSSRRSRRDSDGDRKKKSTKSESESHSDSDSDSDRRHRSSSRRPRRDSDGDRKKKSSRSITEEEITQYMTKKAQSKAMKVAKKLKTSTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSQGVSIEAFSKKAEKKKQRERMAEIEKVKKRREERALEKARHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVNEMSELRDDIKMHLDLDRATPTHVEYWEALLLVCDWELAEAQRKDALDRARVRGEEPPAELLAEERGLHSSVEPDVKKLLQGKTHAELEALRVHIESEMRTGTAKVVEYWEAILKHLHIYKAKACLKEIHAKLLRKHLQSLERPLEDEDKLENAHVMVPEEEDTEDDIKVRSADESFSPEPIREDQEADDEAGSFSPQLLHSDENEEAIDPEEDRAMLERNRKAVLEEQQRRVQEAMASKPAPSEDNFEMKALKAMGDMEDGDSVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1564 673 PANTHER BNAC05G02180D PROTEIN 2 673 - -
Gso19g1564 673 MobiDBLite consensus disorder prediction 411 451 - -
Gso19g1564 673 Pfam Cactus-binding C-terminus of cactin protein 549 673 IPR019134 GO:0005515
Gso19g1564 673 MobiDBLite consensus disorder prediction 411 482 - -
Gso19g1564 673 Coils Coil 165 209 - -
Gso19g1564 673 SMART CactinC_cactus_3 549 673 - -
Gso19g1564 673 Pfam Conserved mid region of cactin 201 398 IPR018816 -
Gso19g1564 673 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 2 673 - -
Gso19g1564 673 MobiDBLite consensus disorder prediction 1 97 - -
Gso19g1564 673 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1564 Gso-Chr19 44586865 44592922 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1564 K25058 - gmx:100780087 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1564 19 44586865 44592922 Gso3g1583 3 41774085 41780135 GST