Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1569 ATGTCTGGCCCCGTGACCATAGCTGATTATTCAAATGGAGGAGCACTTTCTTGTGCAGAGAGAACAAAATCTGTTGATGCGATTCCTGAATTAGACCATCTGTCAATATTGACAAATGGTGAAATTGACGGCTTTAGTGTTGGACAACTCTTACTTTTTAATGGGGAGTCATATTCTGGATCCCTTTATGGCAATGTTTCTGAAGGCCATGGAACGTACGTGTGGTGTGATGGTTGCGTATACGAGGGTGAATGGAGGAGAGGGATGAGAAATGGTTATGGAAAACTAAGATGGCCTTCAGGAGCAGTGTATGAAGGTGATTTCTCTGGTGGATATATCCATGGTACGGGCACATACATTCGTTCTGATAAATTGAAATATAAAGGTAGATGGAGGTTGAATCTTAAACATGGTTTGGGGTTTCAAGTTTATCCTAATGGAGATACCTTTGAAGGGTCTTGGATGCAAGGAACACAAGAGGGGCCTGGCAAGTATACCTGGACCAATGGAAATGTGTATGTAGGGAATATGAAAGGTGGGATAATGTCAGGAAAAGGAACTCTTACTTGGATAAATGGGGACTCATACGAAGGAAACTGGTTAAATGGCATGATGCATGGGTTTGGAGTTTATACTTGGAGTGATGGAGGATGCTATGTTGGGACTTGGACATTTGGTCTAAAAGATGGCAAAGGAACCTTTTACCCGAGAGGTAGCCGTCTTCCTTGGGTGCAAGAAATTTACCTCAGTGCCTTGAGAAAAAGAGGGTTGCTGCCAGATTTGAGAAAACAGAAACAGGTGAGAGATGTCAAGGTACCAGAGAACCATATGTCAAGTCATGTTTCATCTGATAAGTTTGCAAAAGGAAACCTGTTAAATCTGGAAGAGTCTAATAGAAGAAATGTCTCTCTCGAAAGGCGTTGGAGTCTTGAGGTGTCTATTGAGAAGGTGATTGGATATGATTCAGCATTAAGATTTGCAGAATCTGTACCAGAAAGTAGAGATGGAGAAGTTGATGCAATGATCCCAATTTTGGAACGAGAGTACATGCAAGGTGTGTTAATAAGTGAGGTTGTGTTAAATAATATGTTTTCATCAATGTCTAGAAGGGCACGGCGACTTCAAAAAAAGCTTGTCAAAGAGATTAAAAGACCTGGTGAGGCAATCATTAAAGGTCACAGGAGTTATGATCTGATGCTCAGTTTGCAGCTTGGAATAAGGTATACTGTGGGCAAGATAACACCTATACCGACTCGAGGAGTTAGAGCATCAGATTTTGGTCCCAAAGCAAGCTTTTGGATGGATTTTCCTAAAGAAGGTTCTCAATTAACACCTACTCATCAATCAGATGATTTTAAATGGAAAGATTATTGTCCCATGGTATTTAGAAATTTGAGAGAGCTGTTCAAGATTGATGCTGCCGATTACATGATGTCCATTTGTGGAAACGATACTCTGAGGGAACTATCTTCTCCGGGGAAAAGTGGTAGTGTCTTCTTCCTGTCTCAGGATGATCGTTTCATGATCAAGACACTGCGAAGATCTGAAGTCAAGGTCCTTCTAAGAATGCTTCCAGACTATCATCATCATGTGAAGTCATATGAAAATACACTTATCACAAAATTTTTTGGTCTGCACAGGATTAAACCTTCAAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTCTGCACAGACTTAAGGATCCATCGGAGGTTTGATTTAAAAGGTTCTTCCCTTGGAAGATCATCAGACAAGATAGAAATTGATGAGAGTACTACGCTCAAAGATTTGGATCTGAACTACAGCTTCTACCTGGAACCATCTTGGCGAGAGTCTTTACTAAAGCAGATTGAAATAGACAGCAAATTTTTGGAAGCACAGCACATTATGGATTACAGCCTTCTTCTAGGTGTTCACTATAGAGCTCCCCAGCATCTACGTTCTCACGTTTCATACAACCAAAGTAGAAGTGTGGATGGATTAGCAATGCTTGCAGAGGAAGATCCTCTAGAGGATGAAGTATTCTATCCGCAAGGCCTTGTTCTAGTTCCTCGAGGAGGAGATGATGACAGTGTTGTTGTTGGCTCACACATGAGGGGTAGCCGGTTGCGAGCTTCATCTGCTGGTGATGAGGAGGTGGATCTACTTCTACCTGGTACAGCAAGACTCCAAATACAGCTTGGTGTGAACATGCCATCAAGGGCAGAACAGATTTTAGGAAAACAAAAACAAGAAAAGCAAATGTTTCATGAAGTGTACGATGTGGTGCTGTACCTTGGTATCATTGACATATTGCAGGACTACAACATGACTAAGAGGATTGAACATGCTTATAAATCTCTTCAGTTTGATTCATTGTCTATCTCAGCTGTGGACCCTACGTTCTATTCGCATCGCTTCCTGGAATTTATTCAGAAGGTGTTTCCACCAAATGCAACGACAGGTTAA 2457 0.4131 MSGPVTIADYSNGGALSCAERTKSVDAIPELDHLSILTNGEIDGFSVGQLLLFNGESYSGSLYGNVSEGHGTYVWCDGCVYEGEWRRGMRNGYGKLRWPSGAVYEGDFSGGYIHGTGTYIRSDKLKYKGRWRLNLKHGLGFQVYPNGDTFEGSWMQGTQEGPGKYTWTNGNVYVGNMKGGIMSGKGTLTWINGDSYEGNWLNGMMHGFGVYTWSDGGCYVGTWTFGLKDGKGTFYPRGSRLPWVQEIYLSALRKRGLLPDLRKQKQVRDVKVPENHMSSHVSSDKFAKGNLLNLEESNRRNVSLERRWSLEVSIEKVIGYDSALRFAESVPESRDGEVDAMIPILEREYMQGVLISEVVLNNMFSSMSRRARRLQKKLVKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPIPTRGVRASDFGPKASFWMDFPKEGSQLTPTHQSDDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDTLRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTDLRIHRRFDLKGSSLGRSSDKIEIDESTTLKDLDLNYSFYLEPSWRESLLKQIEIDSKFLEAQHIMDYSLLLGVHYRAPQHLRSHVSYNQSRSVDGLAMLAEEDPLEDEVFYPQGLVLVPRGGDDDSVVVGSHMRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAEQILGKQKQEKQMFHEVYDVVLYLGIIDILQDYNMTKRIEHAYKSLQFDSLSISAVDPTFYSHRFLEFIQKVFPPNATTG* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1569 818 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 39 814 - -
Gso3g1569 818 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 481 809 IPR002498 GO:0016307|GO:0046488
Gso3g1569 818 SMART morn 56 77 IPR003409 -
Gso3g1569 818 SMART morn 194 215 IPR003409 -
Gso3g1569 818 SMART morn 148 169 IPR003409 -
Gso3g1569 818 SMART morn 217 238 IPR003409 -
Gso3g1569 818 SMART morn 79 100 IPR003409 -
Gso3g1569 818 SMART morn 102 123 IPR003409 -
Gso3g1569 818 SMART morn 125 146 IPR003409 -
Gso3g1569 818 SMART morn 171 192 IPR003409 -
Gso3g1569 818 SMART PIPK_2 422 812 IPR002498 GO:0016307|GO:0046488
Gso3g1569 818 PIRSF PIP5K_plant 16 815 IPR017163 GO:0005524|GO:0016308
Gso3g1569 818 Gene3D - 564 811 - -
Gso3g1569 818 Gene3D - 203 251 - -
Gso3g1569 818 Gene3D - 111 156 - -
Gso3g1569 818 Gene3D - 157 202 - -
Gso3g1569 818 Gene3D - 60 110 - -
Gso3g1569 818 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 39 814 IPR023610 -
Gso3g1569 818 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 54 180 - -
Gso3g1569 818 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 381 563 IPR027484 -
Gso3g1569 818 Pfam MORN repeat 219 240 IPR003409 -
Gso3g1569 818 Pfam MORN repeat 58 80 IPR003409 -
Gso3g1569 818 Pfam MORN repeat 173 194 IPR003409 -
Gso3g1569 818 Pfam MORN repeat 127 149 IPR003409 -
Gso3g1569 818 Pfam MORN repeat 81 102 IPR003409 -
Gso3g1569 818 Pfam MORN repeat 196 217 IPR003409 -
Gso3g1569 818 Pfam MORN repeat 150 172 IPR003409 -
Gso3g1569 818 Pfam MORN repeat 104 123 IPR003409 -
Gso3g1569 818 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 392 811 IPR002498 GO:0016307|GO:0046488
Gso3g1569 818 CDD PIPKc_AtPIP5K_like 395 810 - -
Gso3g1569 818 SUPERFAMILY SAICAR synthase-like 391 811 - -
Gso3g1569 818 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 167 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1569 Gso-Chr3 41627645 41635655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1569 14 814 Acyl Lipid Metabolism Gene Families AT3G09920 73.762 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1569 K00889 - gmx:100800418 1663.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1569 3 41627645 41635655 Gso3g1569 3 41627645 41635655 ECH
Gso3g1569 3 41627645 41635655 Gso10g0516 10 5664367 5678517 PCT
Gso10g0516 10 5664367 5678517 Gso3g1569 3 41627645 41635655 PCT