Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0516 ATGTCTGGCCCTGTGGCCACAGTTGATAATTTGGATGGAGCACTTTCTTGTGCAGAGAGAACAAAATCTCTTGATGCCATTTCTGAAATAGATCATTTATCTATATTTACAAACGGTGAAGCTGGTCATTCCTCTGAAGTTGCTGGATTTAGAGTAGGGGAACTCTCACTTCCTAATGGAGAATCATATTCTGGGTCCCTTCTTGGTAACATTCCAGAGGGTCAAGGTAAGTATGTATGGCCAGATGGTTGTGTATACGAGGGTGAGTGGAGACGAGGGATGAGAAATGGATATGGGAAAATACAATGGCCTTCTGGAGTAATGTATGATGGTGAGTTCTCAGGTGGCTATATCCATGGTACAGGAACATATATTGGCCCTGATAATCTGACCTACAAAGGTCGGTGGCGATTAAATGTTAAACATGGGTTGGGTTATCAAGTTTATCCAAATGGAGATATATTTGAAGGCTCTTGGATTCAAGGAACACCTGAGGGGCCAGGCAAGTATACCTGGGCCAACGGAAATGTATATTTGGGAAATATGAAAGGTGGGAGAATGTCAGGAAAAGGAACTCTCACCTGGGTAAGTGGGGACTCATTTGAAGGAAGCTGGTTAAATGGCATGATGCATGGGCTTGGGGCATATACATGGAGTGATGGAGGCTGCTATGTTGGGACTTGGACACGGGGTCTAAAAGATGGCAAAGGAACCTTCTATCCGAGAGGTAGCTGTCTTCCATCTGCACAAGAAATATATCTCAATGCATTGAGAAAAAGAGGGCTGTTGCCAGATTTGAGAAAACAGAAACAGATACATATTCATCATGCTGCTTCAGTTGATATGGGAGATGTCAAGGTTGGTGAAAGTCAGAGATCAAATCGTGTTTCATCTGATAAGCTCGCCAAAGGAAACTTGTTAAATCTGGAACAATCTCGTAGCAAAAATATTTCTCTCGAAAGGCGCTGGAGTCTTGAGGTATCTATTGAGAAAGTGATTGGGCATGATTCAAGATTAGGATCAACAGATTCTGTAGCAGAAAATGGAGATAAAGTCCCAATTTTGGAACGCGAGTATATGCAAGGTGTGTTAATAAGTGAATTAGTTTTAAATAATAGTTTTTCATCAATGTCTAGAAGGGCAAAACAGCTCCAAAAAAAACTTGCCAAAGAAATTAAAAGACCTGGTGAAGCAATCATTAAAGGTCACCGGAGCTATGATCTGATGCTTAGTTTGCAGCTCGGAATAAGGTATACTGTGGGGAAGATTACCCCAATACAGAGACGAGAAGTTCGAGCATCAGATTTTGGTCCTAGAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTGACACCTCCTCATCAATCAGAGGGTTTTAAATGGAAAGATTACTGCCCTATGGTGTTCAGAAATTTGAGAGAGTTGTTCAAGATTGATGCTGCTGACTATATGATGTCCATTTGTGGAAATGATGCTCTGAGGGAACTTTCTTCTCCAGGGAAAAGTGGTAGTGTCTTTTTCCTGTCTCAAGATGATCGATTCATGATTAAGACACTGCGAAGATCTGAAGTGAAGGTTCTTCTAAGAATGCTTCCAGACTATCATCACCATGTGAAGACATATGATAATACACTTATCACAAAATTTTTTGGTCTGCACAGGATTATACCTTCGAGTGGTCAAAAGTTTCGCTTTGTCGTGATGGGAAATATGTTCTGCACAGAATTAAGGATCCATAGGAGATATGATTTGAAAGGTTCATCTCTTGGACGTTCTTCGGACAAGATAGAAATTGATGAAAACACCACTCTTAAAGATTTGGATCTGAACTACTGCTTTTACTTGGAACCATCTTGGCAGGAGTCTTTATTGAAGCAGATTGAGATTGACAGCAAGTTTTTGGAATTACAACAGATAATGGATTACAGCCTCCTCCTAGGTGTTCATTATCGAGCTCCCCAGCAGCTGCATCCATACAACCAAAATAGAACTGCAGATGGATTGCCAATTCTTGCAGAGGAAGACCCTCTAGAGGATGAAGGATCCAACTATCCACAAGGCCTTGTTCTGGTCCCTCGGGGTACAGATGATGATAGTGTTGTTGTAGGGTCACACATTAGGGGTAGCAGATTGCGAGCTTCGGCTGCTGGGGATGAGGAGGTGGATCTACTTCTACCCGGTACAGCAAGACTACAAATCCAGCTAGGTGTGAACATGCCAGCGAGGGCAGAACAGATTCCAGGAAAAGAGGAAATGCAAATGTTCCATGAGGCTTATGATGTCGTACTTTACCTGGGTATAATTGACATATTGCAAGAGTACAACATGACTAAGAAGATTGAACATGCATACAAATCAATTCAGTTCGATTCATTGTCTATCTCGGCAGTGGATCCAACATTCTACTCGCGTCGCTTCCTGGATTTTATTCAGAAAGTGTTCCCACCACATGAAATGGCAGGATAA 2475 0.4178 MSGPVATVDNLDGALSCAERTKSLDAISEIDHLSIFTNGEAGHSSEVAGFRVGELSLPNGESYSGSLLGNIPEGQGKYVWPDGCVYEGEWRRGMRNGYGKIQWPSGVMYDGEFSGGYIHGTGTYIGPDNLTYKGRWRLNVKHGLGYQVYPNGDIFEGSWIQGTPEGPGKYTWANGNVYLGNMKGGRMSGKGTLTWVSGDSFEGSWLNGMMHGLGAYTWSDGGCYVGTWTRGLKDGKGTFYPRGSCLPSAQEIYLNALRKRGLLPDLRKQKQIHIHHAASVDMGDVKVGESQRSNRVSSDKLAKGNLLNLEQSRSKNISLERRWSLEVSIEKVIGHDSRLGSTDSVAENGDKVPILEREYMQGVLISELVLNNSFSSMSRRAKQLQKKLAKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRASDFGPRASFWMNFPKEGSQLTPPHQSEGFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKTYDNTLITKFFGLHRIIPSSGQKFRFVVMGNMFCTELRIHRRYDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWQESLLKQIEIDSKFLELQQIMDYSLLLGVHYRAPQQLHPYNQNRTADGLPILAEEDPLEDEGSNYPQGLVLVPRGTDDDSVVVGSHIRGSRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKEEMQMFHEAYDVVLYLGIIDILQEYNMTKKIEHAYKSIQFDSLSISAVDPTFYSRRFLDFIQKVFPPHEMAG* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0516 824 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 14 820 IPR023610 -
Gso10g0516 824 CDD PIPKc_AtPIP5K_like 405 816 - -
Gso10g0516 824 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 391 573 IPR027484 -
Gso10g0516 824 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 58 180 - -
Gso10g0516 824 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 402 817 IPR002498 GO:0016307|GO:0046488
Gso10g0516 824 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 491 815 IPR002498 GO:0016307|GO:0046488
Gso10g0516 824 Gene3D - 574 817 - -
Gso10g0516 824 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 14 820 - -
Gso10g0516 824 SMART morn 176 197 IPR003409 -
Gso10g0516 824 SMART morn 222 243 IPR003409 -
Gso10g0516 824 SMART morn 199 220 IPR003409 -
Gso10g0516 824 SMART morn 84 105 IPR003409 -
Gso10g0516 824 SMART morn 107 128 IPR003409 -
Gso10g0516 824 SMART morn 130 151 IPR003409 -
Gso10g0516 824 SMART morn 153 174 IPR003409 -
Gso10g0516 824 SMART morn 61 82 IPR003409 -
Gso10g0516 824 SUPERFAMILY SAICAR synthase-like 401 817 - -
Gso10g0516 824 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 164 242 - -
Gso10g0516 824 Gene3D - 183 256 - -
Gso10g0516 824 Pfam MORN repeat 63 85 IPR003409 -
Gso10g0516 824 Pfam MORN repeat 155 177 IPR003409 -
Gso10g0516 824 Pfam MORN repeat 109 129 IPR003409 -
Gso10g0516 824 Pfam MORN repeat 201 222 IPR003409 -
Gso10g0516 824 Pfam MORN repeat 132 153 IPR003409 -
Gso10g0516 824 Pfam MORN repeat 178 199 IPR003409 -
Gso10g0516 824 Pfam MORN repeat 86 106 IPR003409 -
Gso10g0516 824 Pfam MORN repeat 224 244 IPR003409 -
Gso10g0516 824 Gene3D - 92 136 - -
Gso10g0516 824 Gene3D - 137 182 - -
Gso10g0516 824 Gene3D - 52 91 - -
Gso10g0516 824 PIRSF PIP5K_plant 6 821 IPR017163 GO:0005524|GO:0016308
Gso10g0516 824 SMART PIPK_2 432 818 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0516 Gso-Chr10 5664367 5678517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0516 10 818 Acyl Lipid Metabolism Gene Families AT3G09920 74.634 0.0 1259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0516 K00889 - gmx:100805371 1678.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1569 3 41627645 41635655 Gso10g0516 10 5664367 5678517 PCT
Gso10g0516 10 5664367 5678517 Gso3g1569 3 41627645 41635655 PCT