Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1558 ATGGATGAAGATCCTAAGAGAATGGAAGAAGGCCTCAATTCAGCATTGAATGGTGATGGCAATAAGGATGACTTGAAGAAGAGGGCAACCATTAAAACCAGTAATGGAGGTTCTATTTTTGAGCATGACAAAGACACAATGGCTAAGCCTGTGGCTGAGGGTGAGTCCGTACAGCAAATAGCTGAACAGGAGCAACCACCGGTTAAGCAGAAGACAAAGAGGGTTGCAACCCTTGATGCATTTAGGGGTCTCACCATAGTGTTGATGATTCTGGTAGACGATGCTGGTGAAGCTTATCCACGCATTGATCATTCCCCTTGGAATGGATGTACTTTGGCCGATTTCGTTATGCCTTTCTTTCTTTTCATTGTTGGGGTTGCCATAGCCCTTGCACTAAAGAGAATCTCAAAGATAAAGCATTCCGTAAAGAAGATAATCCTTAGGACATTGAAGCTTCTCTTCTGGGGTATAATTTTGCAAGGGGGTTACTCTCATGCCCCTGATGATCTCGAATATGGAGTTAACATGAAATTTATACGATGGTGTGGCATTCTCCAGAGAATCGCTCTTGTATACTGTGTTGTAGCTCTAATAGAAACATTTACCACCAAGCTTAGACCCACTACGTTGGCTTCTGGACACCTATCCATTTTTGCTGCTTATAAATGGCAATGGTTTGGGGGCTTCGTGGCATTTCTCATTTATATGATCACAACCTTCAGCCTCTACGTTCCAGATTGGAGTTTCGTGGATCACTTTAACGGCGATGAACCAAAGAGATACACGGTCATATGTGGGATGAGAGGACACCTAGGGCCAGCATGTAATGCTGTTGGGCACGTGGACCGACAGGTTTGGGGGGTCAACCATCTTTATTCTCAACCAGTTTGGAGACGCTTGAAGGCGTGTACATTCAGTTCTCCAGGCAGTGGTCCTTTTCGTGATGATGCCCCAAGTTGGTGTCTTGCTCCTTTTGAACCCGAAGGCTTGTTGAGTTCTATATCAGCAATCCTCAGTGGCACTATCGGCATCCATTACGGGCACGTCCTGATTCACTTCAAGGGTCATTCGGAGAGGCTAAAACAATGGGTCTCAATGGGGTTTGTGTTACTCATCATAGCCATCATCCTTCACTTCACAGATGCTTTACCAATTAACAAGCAACTCTACAGCTTCAGCTATGTTTGTTTCACAGCTGGGGCAGCTGGAATTGTCTTCTCTGGGTTCTACATACTGATCGATGTTTGGGGGCTCCGCACACCATTCCTGTTCTTGGAGTGGATAGGAATGAATGCTATGCTAGTGTTTGTGATGGCAGCGGAGGGCATCTTTGCAGCATTTGTAAATGGATGGTATTATGAAGATCCACGTAGCTCACTAGTACACTGGATCAAGAAGCATGTGTTTGTCAATGTTTGGCACTCAGAGAGGGTGGGAACCATCTTATATGTCATCTTTGCAGAAATCACTTTCTGGAGTGTGGTTGCTGGCGTCTTACACAAATTAGGAATATATTGGAAACTATAA 1527 0.4473 MDEDPKRMEEGLNSALNGDGNKDDLKKRATIKTSNGGSIFEHDKDTMAKPVAEGESVQQIAEQEQPPVKQKTKRVATLDAFRGLTIVLMILVDDAGEAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRISKIKHSVKKIILRTLKLLFWGIILQGGYSHAPDDLEYGVNMKFIRWCGILQRIALVYCVVALIETFTTKLRPTTLASGHLSIFAAYKWQWFGGFVAFLIYMITTFSLYVPDWSFVDHFNGDEPKRYTVICGMRGHLGPACNAVGHVDRQVWGVNHLYSQPVWRRLKACTFSSPGSGPFRDDAPSWCLAPFEPEGLLSSISAILSGTIGIHYGHVLIHFKGHSERLKQWVSMGFVLLIIAIILHFTDALPINKQLYSFSYVCFTAGAAGIVFSGFYILIDVWGLRTPFLFLEWIGMNAMLVFVMAAEGIFAAFVNGWYYEDPRSSLVHWIKKHVFVNVWHSERVGTILYVIFAEITFWSVVAGVLHKLGIYWKL* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1558 508 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 74 219 IPR012429 -
Gso3g1558 508 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE PROTEIN 1 508 - -
Gso3g1558 508 PANTHER LD22376P 1 508 - -
Gso3g1558 508 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1558 Gso-Chr3 41516847 41522472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1558 K10532 - gmx:100819967 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1558 3 41516847 41522472 Gso3g1558 3 41516847 41522472 ECH
Gso3g1558 3 41516847 41522472 Gso10g0136 10 1393195 1399970 PCT
Gso10g0136 10 1393195 1399970 Gso3g1558 3 41516847 41522472 PCT