Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0136 ATGTCAAGTGAGGTAGAAGAAGAAGAAAGAAGACCTCTTATCGGCCATGATTTAGGTTCCTCAATTCTCATCGTTCATCAAAATGAAGACACTATCTCAATCTGTCCTTTGCCACAATCCAATCCTACAGATACATCCTCTCTTTCTCTTCCTAATCAACGCCTTTCTTCTCTCGATGTCTTCCGCGGTCTAACTGTTGCGTTGATGATATTAGTTGATAATGTGGGAAGGGCATTCCCGTCCTTGAATCATTCTCCATGGTTTGGAGTGACACTGGCCGATTTTGTAATGCCGTTTTTTCTCTTTGTGGTTGGCGTTTCGATCGGTCTGGTATTCAAGAAAGTCTCTAGCAAACCCAACGCCTCAAAGAAAGTCATATCGAGGACACTTAAGCTTTTCCTTTTGGGACTGTTACTTCAAGGTGGGTATTTCCATGGGCACGGCAAATTAACATATGGAGTTGATTTGAGCAAGATACGCTGGCTTGGCGTACTTCAGAGGATATCTATTGGATATTTCTTTGCCTCGATATCAGAGATTTGGCTTGTAAACCATAATATTTTGGTTGACTCACCTGCAGGTTTTGTGAGGAAATACTCCATTCAGTGGATGTTTTCTATCTTACTTTGCTCAGTGTACCTTTGTTTGCTCTACGGTCTTTATGTTCCGAATTGGAAATTCAAACATTCTAATTTGCTTTGGTCCAGTGACTCCAGTCATCTATCAATTATTCAAAACGTTCATTGTGAAGTGAGGGGCAGTCTTGAACCTCCTTGTAATGTTGTGGGATTTATTGATAGATTAATTCTTGGTGAAGATCATATGTACCAGCGTCCTGTGTACATAAGAACAAAGGAGTGTAGTGTCAATTCTCCTGACTATGGACCCTTGCCTCCAGATTCACCTGGATGGTGCCTTGCACCATTTGACCCAGAGGGTATTTTGAGTTCACTGATGGCTGCAATTACTTGTTTCATGGGATTGCAATATGGGCACATAATTGTACATTTGCAGGGCCACAAGCAGAGGGTACTTCTTTGGTCTGTGTTTTCCTTCTCTCTATTGCTCATAGGATACATTCTGGAGATCTTAGGAATGCCTTTATCAAAAGCACTGTACACATTAAGCTACACGTGTATCACTGCAGGGGCATCAGGCTTAGTCTTGACTGCTATCTATTACATTGTTGACATAGAACATCTCAGAAAGCCTACAGTTTTACTGCAATGGATGGGAATGAATGCTCTTGTTGTATATGCATTGGCAGCTTGTGACATTTTCCCAGCAGTTATCCAGGGTTTCTATTGGCATTCTCCTGAAAATAATTTGGTTGACGCCAGTGAAGCTTTAATGCAGATCATATTTCATTCCAAAAGGTGGGGTACACTGGCCTTTGTAATAGTTGAGATTTTATTCTGGGGTCTTTTTGCTGGTTTCCTCCACAAGAAAAGGATATATATAAAATTGTAA 1470 0.4095 MSSEVEEEERRPLIGHDLGSSILIVHQNEDTISICPLPQSNPTDTSSLSLPNQRLSSLDVFRGLTVALMILVDNVGRAFPSLNHSPWFGVTLADFVMPFFLFVVGVSIGLVFKKVSSKPNASKKVISRTLKLFLLGLLLQGGYFHGHGKLTYGVDLSKIRWLGVLQRISIGYFFASISEIWLVNHNILVDSPAGFVRKYSIQWMFSILLCSVYLCLLYGLYVPNWKFKHSNLLWSSDSSHLSIIQNVHCEVRGSLEPPCNVVGFIDRLILGEDHMYQRPVYIRTKECSVNSPDYGPLPPDSPGWCLAPFDPEGILSSLMAAITCFMGLQYGHIIVHLQGHKQRVLLWSVFSFSLLLIGYILEILGMPLSKALYTLSYTCITAGASGLVLTAIYYIVDIEHLRKPTVLLQWMGMNALVVYALAACDIFPAVIQGFYWHSPENNLVDASEALMQIIFHSKRWGTLAFVIVEILFWGLFAGFLHKKRIYIKL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0136 489 PANTHER LD22376P 6 489 - -
Gso10g0136 489 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 54 169 IPR012429 -
Gso10g0136 489 PANTHER OS05G0155700 PROTEIN 6 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0136 Gso-Chr10 1393195 1399970 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0136 K10532 - gmx:100802361 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1558 3 41516847 41522472 Gso10g0136 10 1393195 1399970 PCT
Gso10g0136 10 1393195 1399970 Gso3g1558 3 41516847 41522472 PCT