Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1528 ATGGTATCGAAGAGTAAAATGGAAGCAGGGACATTGAGTCCTAACCACCCTCCTTGCTTTCTTCGTCAGTCACTTCCTGCTGTTGCACCTATGCTTCTGATTTCAACAGGATATGTTGACCCTGGAAAGTGGGTAGCCACTGTTGAAGGTGGTGCACGGTTTGGGTTTGATCTGATGGCTGTCATGCTTATTTTCAATTTTGCTGCTATCTTCTGTCAGTACATATCTGCAAGGATTGGTGCGATTACTGGAAAAAGTCTAGCTCAGATTTGCAGTGATGAGTATGATACATGGACATGCATGCTCCTTGGAGTTCAAACAGAACTTTCAGTGATAATGCTAGACCTTAACATGATCTTGGGCATGGCACAAGGATTAAATCTTATTTTTGGGTGGGACTTGTTCGCTTGTGTCTTTTTAACTGCTACTGGTGCTGTTTTTCATATACTTCTCTCAGTTCTCCTTGACATTGAGAAGGCAAAAATCCTAGGACCGTTTGTTGCTGGTTTTGTATTGCTTGCTTTTATACTTGGACTGCTTATCAATCAACCGGAAATTCCATTTTCCATGAATGGAATACCAACAAGGTTGAGTGGGGAGAGTGCATTTGTGCTAATGAGTCTTCTAGGAGCAAATCTTGTACCTCACAACTTTTACCTTCATTCCTCTATTGTACAGTGGCATCAGGGATTGACAAGCATTTCTAAGAATGCTTTGTGTCATAACCACTTTTTGGCCATATTATGTGTTTCCAGTGGTCTTTATTTGGTAAATAATATGCTGATGACCGCCTCAGCAAATGAGTTCTACAGTACAGATCCTGTTCTGCTTACTTTTCAGGATGCATTGTCACCCATGGAACAGGTCTTACGTAGCCCAATAGCTCTGCTTGGGTTTTTGCTCATTTTGTTTCTTGCAAATCAAACCACAGCATTAACTTGGAGTTTAGGCGGAGAAGTAGTAGTGCGTAATTTCTTAAAATTGGATATTCCAGGTTGGCTTCATTATGCTACAATTAGAGTGATTGCTGTTTTGCCTGCCCTTTATTGTGTCTGGAGTTCAGGAGCTGAGGGGATGTATCAGCTACTATTATCCACACAAGTTTTGGTAGCTCTGCAACTTCCATCTTTTGTGATCCCTCTTTTTCGAGTTGCCACATCTAGATCAATAATGGGTGTACACAAGATATCCCAGTTTCTGGAACTTTTGGCATCGATCATATTCATTGGTATGCTTGGCTTGAATATTGTCTTCGTGGTAGAAATGATATTCGGCAATAGTGACTGGGCAAGTGATTTGAGATGGAATGTTGGGAGTGGTGTGTCTGTCTCATATTTAGTTCTTCTTACCGCTGCTATTACATCGTTATGTTTGATGCTTTGGTTAGCCGCCACACCTTTAAGATCTGCCAGTGTCCAATTAGATGCTCAGACATGGAACTGGGATATGCCAGAGACTCTGCCAACTCCTCCAGTTGTTGGGGAGGAATTGTATTTAACTGAAAAAAAGTGTCATGAAGATGTATCTAAGCATGTGGAGGAACACACACCAGCTGTAGCAAAAAGCTTGGACTACTCAGATGTATCACTTCCAAGTTTTCATCCTGATCTACCTGAATCTTTAATGGAACCTGAACCCCATGTGAATGCTGTAAGGGATAATTATTCTCTTATATCGACTTCCACATCAGAGTTAGAGGCAGTATATGCTGTAGTTAATGAGACTTCTGATTCTTGTTTGGAAGACACCAAAACCATAACAATGGAAACAAACGCTGAAAGGGATGACGATGATTCATGGGAAACTGAAGAACCTTCTGGAGTGGTATCAGCCAGTGTTCCATCTTCAACATCAGATGGCCCTGCATCATTCAGGAGTCTTAATGGCAAAAGTGATGAAGGAGGGAATAGCTGTGGAAGTCTTTCAAGAATAGAAGGCTTAGGGCGTGCAGCAAGGCGTCAGCTAGCTACTGTTCTTAATGAATTCTGGGGACAACTATATGATTTGCATGGACAAGTAACCCAGGAGGCAAAGGCTGGGAAAATTGACCTTTTGCTGGGAGTGGGTGTAGATTCAAGGCCCACCAGTTCCTTGCAAAAAGTGGATGCATGTGGAAAGGATTATTCTGAATACTTAGTATCTGTCAGAGGTAGAGCTTCTGACGCATTAATGAACTCTGCTTCATATGATTCTTCCAAGCAGCCTATGATGCAAAGTAATTCAGAGTCTTATGGCCTTCAAAGGAGTTCTTCCTCAATGTGGGCAAATCCCATCCAATTATTGGATGCATATGTACAGAACTCTAGCCACAATCTCCTCAATTCTGGTGAGAGGCGCTATTCAAGTGTGCGTAATCTACATTCATCAGAAGCTTGGGATTATCAACCAGCTACCATACATGGTTATCAGACTGCATCCTATCTTAGCCGGCTTGGTAAAGACAGAAATTCTGCTAACTTAAATTGTCAGGTGGACTTGTCATCACTGAAATCCCCTTCCATAGTTAATACAAAGTACAGGGATTCACTTGCATTTGCTTTGGGGAAAAGGTTGCAAAGTGGCTCAGGTGTGGGCCAACCCCCAGGGTTCCCAAATGTAGCTGTCTCTAGAGATTCCCAATTACAATCTGAGAGGTTTTATTATGACTTATGCTCTTCTGGATCTGCAGATAATACAGTCAATTCAGTTAATACTAAAAAGTACCACAGTTTGCCAGACATTTCAGGATACTCCATCCCCCACAGGGCTGGTTATGTGTCTGATAAAAATGCTCCAAGGGATGGTTCTGTTGGATATGGATCTTTTGCTAGTAGGACGTGCTATGACCAATCATTATATTTAAATTCTGGATCAAGAACAGGAGGTCATTTGGCCTTCAATGAACTTCCTTTGTCTGAAGTTTACAACAAGGCACTCTCTTCACAGTTGAGTTCTGGTTTTGATACTGGATCCCTCCGGTCTAGATTGCCTTATGAGCAGTTTGGGGTAGCTGAGAAAATTCCTAATGTTGCAATGGAAGCTGTTGGAAATAGGCCTAATGCAATTGCTCAAGAAACTACTTCATTTGTGGATATAGAGGGGAAACTTCTTCAGTCTATTAGACTTTGCATTGTGAAGCTCTTGAAACTGGATGGGTCTGATTGGTTGTTTAGACAGAATGGTGGAGCCGATGAGGATCTGATAGATTCTGTTGCTGCAAGGGAGAAGTTGTTTTATGAAATTGAAACCAGGGAGATGAATCAGGTCATTCATATGGATGAAGCTCATTATTTTCCTTCTGATAGGAAATTTGGTTCTTCAATGAAGAGTAATGGGGCATATTCTTCAGGTTTTTCGGTGTCTTCGGTTCCAAATTGCGGGCAGGGATGTATATGGAAAACAGATTTAATAATAAGCTTTGGAGTATGGTGTATCCACAGTATTCTTAACCTCTCAATTGTAGAAAGCCGGCCGGAGCTTTGGGGGAAATACACCTATGTTCTCAATCGCCTCCAGGGCATCATTGATCCAGCTTTCCTTAAGCCTCGGAGTCCCTTGGCTCCATGCTTCTGCCTTCAAGTTCAGCAAAAGTTAAGCCCCCATCTTTCAAATGGGATACTACCCCCAACGACTACAAAACCAGGCCAGGGCAAATGCACAACTGCATCAACGTTGCTTGAACTTATCAAGGAAGTGGAGCTTGCCATCTCTGGCAGGAAAGGACGTACCGGAACTGCCGCAGGCGATGTGGCTTTCCCTATGGGGAAGGAAAATTTGGCGTCTGTTCTCAAACGGTACAAGCGGAGGTTATCTAACAAGCCCGTTGGCACTAATGGAGGGACAGGTTCACGCAAGATCCCCACATTAGCACCATACAACCAATAA 3864 0.4255 MVSKSKMEAGTLSPNHPPCFLRQSLPAVAPMLLISTGYVDPGKWVATVEGGARFGFDLMAVMLIFNFAAIFCQYISARIGAITGKSLAQICSDEYDTWTCMLLGVQTELSVIMLDLNMILGMAQGLNLIFGWDLFACVFLTATGAVFHILLSVLLDIEKAKILGPFVAGFVLLAFILGLLINQPEIPFSMNGIPTRLSGESAFVLMSLLGANLVPHNFYLHSSIVQWHQGLTSISKNALCHNHFLAILCVSSGLYLVNNMLMTASANEFYSTDPVLLTFQDALSPMEQVLRSPIALLGFLLILFLANQTTALTWSLGGEVVVRNFLKLDIPGWLHYATIRVIAVLPALYCVWSSGAEGMYQLLLSTQVLVALQLPSFVIPLFRVATSRSIMGVHKISQFLELLASIIFIGMLGLNIVFVVEMIFGNSDWASDLRWNVGSGVSVSYLVLLTAAITSLCLMLWLAATPLRSASVQLDAQTWNWDMPETLPTPPVVGEELYLTEKKCHEDVSKHVEEHTPAVAKSLDYSDVSLPSFHPDLPESLMEPEPHVNAVRDNYSLISTSTSELEAVYAVVNETSDSCLEDTKTITMETNAERDDDDSWETEEPSGVVSASVPSSTSDGPASFRSLNGKSDEGGNSCGSLSRIEGLGRAARRQLATVLNEFWGQLYDLHGQVTQEAKAGKIDLLLGVGVDSRPTSSLQKVDACGKDYSEYLVSVRGRASDALMNSASYDSSKQPMMQSNSESYGLQRSSSSMWANPIQLLDAYVQNSSHNLLNSGERRYSSVRNLHSSEAWDYQPATIHGYQTASYLSRLGKDRNSANLNCQVDLSSLKSPSIVNTKYRDSLAFALGKRLQSGSGVGQPPGFPNVAVSRDSQLQSERFYYDLCSSGSADNTVNSVNTKKYHSLPDISGYSIPHRAGYVSDKNAPRDGSVGYGSFASRTCYDQSLYLNSGSRTGGHLAFNELPLSEVYNKALSSQLSSGFDTGSLRSRLPYEQFGVAEKIPNVAMEAVGNRPNAIAQETTSFVDIEGKLLQSIRLCIVKLLKLDGSDWLFRQNGGADEDLIDSVAAREKLFYEIETREMNQVIHMDEAHYFPSDRKFGSSMKSNGAYSSGFSVSSVPNCGQGCIWKTDLIISFGVWCIHSILNLSIVESRPELWGKYTYVLNRLQGIIDPAFLKPRSPLAPCFCLQVQQKLSPHLSNGILPPTTTKPGQGKCTTASTLLELIKEVELAISGRKGRTGTAAGDVAFPMGKENLASVLKRYKRRLSNKPVGTNGGTGSRKIPTLAPYNQ* 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1528 1287 MobiDBLite consensus disorder prediction 1267 1287 - -
Gso3g1528 1287 PANTHER ETHYLENE-INSENSITIVE PROTEIN 2 21 1173 - -
Gso3g1528 1287 MobiDBLite consensus disorder prediction 582 638 - -
Gso3g1528 1287 MobiDBLite consensus disorder prediction 1263 1287 - -
Gso3g1528 1287 MobiDBLite consensus disorder prediction 605 638 - -
Gso3g1528 1287 Pfam Natural resistance-associated macrophage protein 44 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso3g1528 1287 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 21 1173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso3g1528 1287 PIRSF EIN2 7 1284 IPR017187 GO:0009873
Gso3g1528 1287 PRINTS Natural resistance-associated macrophage protein signature 103 129 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso3g1528 1287 PRINTS Natural resistance-associated macrophage protein signature 205 228 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso3g1528 1287 PRINTS Natural resistance-associated macrophage protein signature 307 326 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso3g1528 1287 PRINTS Natural resistance-associated macrophage protein signature 335 352 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso3g1528 1287 PRINTS Natural resistance-associated macrophage protein signature 367 386 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1528 Gso-Chr3 41175956 41182903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1528 7 1278 Miscellaneous Gene Families AT5G03280 50.568 0.0 1168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1528 - K14513 gmx:100813034 2527.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1528 3 41175956 41182903 Gso3g1528 3 41175956 41182903 ECH
Gso19g1514 19 44012654 44013583 Gso3g1528 3 41175956 41182903 GST
Gso3g1528 3 41175956 41182903 Gso10g0502 10 5500728 5509615 PCT