Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0502 ATGACTTGTAAATTACCTAATCCTGGTGGTACTAGTAGAAGAGGAAGAATGGAAGCAGAGACTTTGAACGCAAATCACCCTCCCGGTTTTCTTCACCGGTCGCTTCCTGCTGTTGTGCCTATGCTTTTGATTTCAATAGGATATGTTGACCCTGGAAAGTGGGTGGCAATTGCTGAAGGAGGTGCACGATTTGGGTTCGATCTGATGGCCTTCACACTTATCTTTAATCTTGCTGCCATCTTCTGTCAGTACATAGCAGCAAAAATTGGTGTTATCACAGGAAAAGATCTTGCTCAGATTTGCAGTGATGAGTACGATAATTGGACGTGCATGCTTCTTGGAGTTCAAGCAGAACTTTCGGTGATTATGCTAGACCTTAACATGATATTGGGCATGGCACATGGATTAAATATTCTTTTTGGGTGGGACTTGTTCACTTGTGTCTTTTTAACTGCTACTGGTGCTGTTTTCCATCTCCTTCTTTTTGTCATCCTTGACATTGAGAAGGCAAAGATCCTGGGACTGTTTGTGTCAGGTTTTGTATTTCTTTCATTTGTACTTGGAACACTCATTAATCAACCAGACATTCCATTATCCATTAATGGAATACTAACAAAGTTGAATGGGGAGAGTGCATTTGTGCTGATGAGTCTATTAGGAGCAATTCTTGTGCCTCACAACTTCTACCTTCATTCCTCTATTGTACAGTGGCATCAGGGATCAACTACCATTTCTAAGGATGCTTTGTGTCATAACCATTTTTTGGCCATCATGTGTGTCTTCAGTGGCCTTTATTTGGTCAATAATGTGCTGATGAATGCTGCAGCAAATGAGTTCTACAGTATGGGTCTTGTTTTGACTACTTTTCAGGACGCATTATCGCCAATGGAACAGGTGTTGCGTAGTCCAATAGCCATGCTTGCTTTTTTACTCATTCTGTTTTTTTCAAATCAAACCACAGCATTAACTTGGAGTTTCGGTGGAGAAGTAGTAGTGCGAAATTTCTTAAAATTGGATATTCCGGGTTGGCTTCATTATGCTACAATTAGAGTAATTGCTGTTCTGCCTGCCCTTTATTGCGTTTGGAATTCAGGAGCTGAAGGGATGTATCAACTACTTATATTCACTCAGATTGTGGTAGCTCTGCAACTTCCTTCTTCTGTGATCCCCCTTTTTCGGATCGCCTCATCTAGATCAATAATGGGGGTACACAAGATCCCTCAATTTGTGGAATTTTTGGCATTGATCATATTCATTGGGATGCTTGGCTTGAATATTGTCTTTGTTGTAGAAATGGTATTTGGCAGTAGTGATTGGGTGGGCAATTTGAGATGGAATGTGGAGACTGGTGTGTCTCTCTCTTATTTGGTCCTTCTGTGCACTGCTTTTGCATCTTTCTGTCTGATGCTTTGGTTAGCTGCCACACCTTTAAAATCTGCAAGTGTTCAATTGGATGATCAGGCATGGAACTGGGACATGCCACAAGCCATACCAAAGTCACGGATTGATAACGAGGAAACAGATTTAAAAGAAACAAGATATCATGGAGATGCATCAGTTCAGGTGAAGGAACCATCACCAGTTCTAGCAAGGACCCTGGAATACTCAGATGTACCAATTGCAAGTTTTCATCATGATCTACCTGAAACTATCATGGAGCCTGATGTTCCTGTGACTACTGTAAGGGAGACTCATCCATTTACATCATTTCCTTTCTCCCCAACTTCTGTTGTTAAGGAATCAGCTTCCACTTCAGAATCAGAGGCAGTACCAGCTGTAAGTAATGAGACTTCTGATATTATATTGGGAGATTCCAAAACTTTGAAAACAGAAACTACTGCCCCTGTTGAGAAAACTGTAGAAGTTGAGGGAGATTCAAATGCCGAAAGGGATGATGATTATGGAGATTCATGGGAAACTGAAGAAATACCAAAAGTGGTCTCACTAGCCCCATCTTCAGCATCAGATGGCCCAGCATCATTCAGGAGCCTTAGTGGGAAAAGTGATGATGGAGGGAATAGCATTGGAAGTCTTTCAAGATTAGCAGGTTTAGGGCGCGGTGCAAGACGTCAACTAGCTGCTATTCTTGATGAATTCTGGGGACAACTTTTTCATTTCCATGGTCAATTTACCCAGGAAGCTAAGGCCAAGAAACTTGATGTTTTACTGGGAGTAGATTCAACACTCACTGGTTCTTTGCAAAAAATGGATTCATGTAAGGCATGTTATGAATACTTCAAATCTGTAGGAAGTAGAGCTCCAGATACTTTAATGAACTCTGCTCCATATGAATCTCCCAGGCTGAATAGGATGCAAAGTAATTTAGAGGCTTCCTTTGGGCCTCAAAGGAGTTCTTCCTCACTGCAGGCAAATCCTGTCCAGTTTATGGATGAATATGTTCAGACCTCCAGCCGCAATCTCCTTGATGCTGGTGAAAGGCGCTATTTTAGTGTGCACAATCTACCTACATCTGCAGCCTGGGATTATCAGCCAGCTACCATACATGGTTATCAGGTTTCATCATATATTAATCAAGTTGGTAAAGACACAAATTCTGATAAATTAAATGGTCTGAGGGAATCCCCTTCCATGGGTAATACAAACAACTACAGGAATTCTATTGCATTTGCTTTGGGTAAAAAGTTGCAAAACGGTTCTGGTTTAAGCCAACCCCCAGGATTCCCGAACATTGCTGTCTCTAAGAATAGCCAATTGCCATCTGAGAGGTCCTATTATGATTCTCGCCCTTCCGGACCTGTGGATAGTACAGTCAGTTCAGTCTATGCTAAGAAGTTCCACAGCTTGCCAGACATTTCAGGATATGCCATCCCTCACAGGGATGTTTACCTGTCTGATAAAAGTGCTCCATGGGATGATTCTGTTGGTGGATATAGATCTTCTGCAAGTAGGACTCATTATGAACCGTCATTATATTCAAATTCTGGATCAAGTACAGGAGCTCCTTTAGCCTTTGATGTACTCTCTCCATCAAAAGTCTACGGTGGTGTACTTTCTTCTCAGTTGAGTTCTGGTTTTGGCACTGGATCCCTCTGGTCCAGACAGCCTTTTGAGCAGTTTGGGGTGGATGATAAAATTCATAATGCTGCAACAGAAGATGTTGGAAATAGGCCTAGTGCAACTACTCATGAAATTACTTCAGTTGTGGATATTGATGGCAAGCTTCTTCAATCTTTTAGACAATGTATTTTGAAACTCTTAAAATTGGAAGGGTCTGATTGGTTGTTTAAACAGAATGATGGGGCTGATGAAGATCTGATTGACCGTGTTGCTGCAAGGGAGAAATTTGTTTATGAAATTGAAACCACAGAGATGAACCGCAATCATATGGGAGAAACTCGATATCTTTCTTCTGATGGGAAGGCTTGTTCTTCAATGAAGAATAATGAGGCAAATTGGTCTAGTTTTTCTGTAACCTCAATCCCTAACTGTGGGGAAGGATGTGTTTGGAGAGCAGATATAATAATAAGCTTTGGAGTGTGGTGTATCAAACGTGTTCTGGACCTCTCCCTAATGGAGAGCCGACCAGAGCTGTGGGGGAAGTACACTTATGTACTCAATCGCCTCCAGGGCATCATTGATCTGGCTTTCTCCAAGCCTCGTAGTCCCATGACCCCATGCTTTTGCCTTCAAGTTCCCATGACTTACCAGCAGAAGTCAAGCTCGCCTCCTTCCAATGGGATGCTGCCCCCTGCGTCAAAACCGGGCCGTGGAAAATGCACAACTGCATCAGTGGTGTTTGAGATGGTCAAGGATGTGGAGATAGCAATCTCCAGCCGGAAAGGTCGCACAGGAACCGCTGCTGGTGACGTAGCCTTCCCAAAGGGAAAGGAGAATTTGGCATCTGTTCTCAAACGGTATAAGCGTAGATTATCCAACAAACCAGTTGGCACTACTCAAGAAGGGATTCGCAAGATATACTTGTAG 3945 0.4246 MTCKLPNPGGTSRRGRMEAETLNANHPPGFLHRSLPAVVPMLLISIGYVDPGKWVAIAEGGARFGFDLMAFTLIFNLAAIFCQYIAAKIGVITGKDLAQICSDEYDNWTCMLLGVQAELSVIMLDLNMILGMAHGLNILFGWDLFTCVFLTATGAVFHLLLFVILDIEKAKILGLFVSGFVFLSFVLGTLINQPDIPLSINGILTKLNGESAFVLMSLLGAILVPHNFYLHSSIVQWHQGSTTISKDALCHNHFLAIMCVFSGLYLVNNVLMNAAANEFYSMGLVLTTFQDALSPMEQVLRSPIAMLAFLLILFFSNQTTALTWSFGGEVVVRNFLKLDIPGWLHYATIRVIAVLPALYCVWNSGAEGMYQLLIFTQIVVALQLPSSVIPLFRIASSRSIMGVHKIPQFVEFLALIIFIGMLGLNIVFVVEMVFGSSDWVGNLRWNVETGVSLSYLVLLCTAFASFCLMLWLAATPLKSASVQLDDQAWNWDMPQAIPKSRIDNEETDLKETRYHGDASVQVKEPSPVLARTLEYSDVPIASFHHDLPETIMEPDVPVTTVRETHPFTSFPFSPTSVVKESASTSESEAVPAVSNETSDIILGDSKTLKTETTAPVEKTVEVEGDSNAERDDDYGDSWETEEIPKVVSLAPSSASDGPASFRSLSGKSDDGGNSIGSLSRLAGLGRGARRQLAAILDEFWGQLFHFHGQFTQEAKAKKLDVLLGVDSTLTGSLQKMDSCKACYEYFKSVGSRAPDTLMNSAPYESPRLNRMQSNLEASFGPQRSSSSLQANPVQFMDEYVQTSSRNLLDAGERRYFSVHNLPTSAAWDYQPATIHGYQVSSYINQVGKDTNSDKLNGLRESPSMGNTNNYRNSIAFALGKKLQNGSGLSQPPGFPNIAVSKNSQLPSERSYYDSRPSGPVDSTVSSVYAKKFHSLPDISGYAIPHRDVYLSDKSAPWDDSVGGYRSSASRTHYEPSLYSNSGSSTGAPLAFDVLSPSKVYGGVLSSQLSSGFGTGSLWSRQPFEQFGVDDKIHNAATEDVGNRPSATTHEITSVVDIDGKLLQSFRQCILKLLKLEGSDWLFKQNDGADEDLIDRVAAREKFVYEIETTEMNRNHMGETRYLSSDGKACSSMKNNEANWSSFSVTSIPNCGEGCVWRADIIISFGVWCIKRVLDLSLMESRPELWGKYTYVLNRLQGIIDLAFSKPRSPMTPCFCLQVPMTYQQKSSSPPSNGMLPPASKPGRGKCTTASVVFEMVKDVEIAISSRKGRTGTAAGDVAFPKGKENLASVLKRYKRRLSNKPVGTTQEGIRKIYL* 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0502 1314 Pfam Natural resistance-associated macrophage protein 54 406 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso10g0502 1314 MobiDBLite consensus disorder prediction 653 668 - -
Gso10g0502 1314 MobiDBLite consensus disorder prediction 964 983 - -
Gso10g0502 1314 MobiDBLite consensus disorder prediction 604 668 - -
Gso10g0502 1314 MobiDBLite consensus disorder prediction 959 983 - -
Gso10g0502 1314 PRINTS Natural resistance-associated macrophage protein signature 113 139 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso10g0502 1314 PRINTS Natural resistance-associated macrophage protein signature 215 238 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso10g0502 1314 PRINTS Natural resistance-associated macrophage protein signature 317 336 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso10g0502 1314 PRINTS Natural resistance-associated macrophage protein signature 345 362 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso10g0502 1314 PRINTS Natural resistance-associated macrophage protein signature 377 396 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso10g0502 1314 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 30 1204 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso10g0502 1314 PIRSF EIN2 17 1312 IPR017187 GO:0009873
Gso10g0502 1314 PANTHER ETHYLENE-INSENSITIVE PROTEIN 2 30 1204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0502 Gso-Chr10 5500728 5509615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0502 17 1308 Miscellaneous Gene Families AT5G03280 52.771 0.0 1254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0502 - K14513 gmx:100781309 2580.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1514 19 44012654 44013583 Gso10g0502 10 5500728 5509615 PCT
Gso3g1528 3 41175956 41182903 Gso10g0502 10 5500728 5509615 PCT