Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso3g1525 | ATGAAAGAAAAATCGCAAAACAGAGAGAGAAAGAAAACAGAGCAACATTCAATGGCGTCTAGGAAGGGCTTCCTTTCGAAAGTGAGTTCCATGTTTGCATCATCAAGCACCGATTTGGAGCCCAAATCCACAGATGGTGACTTGGAATTGGATGAAGCTGACGTGTTCAACTGGAACATGTCCAATGACTACAACAACAAGAACACTGTGACAGAGTCGAAGAAGAGGCCACGATCTGGTAAGAAGAAAAAGGTGGAGGGTGGTGGTGGCAAAGTGAACCCTGTGGCCTCGTCCTCAATGCCAGTGGCTATTCCTGATTGGTCCAAGATTCTGAAGGAGGACTTCAAGGAGCACGAGAAGAGAGACTTTGTTAGTGACGACGACGATGATCATGACCACGATCGTAGAGAACCAGTGCCTCCTCATGAGTATCTTGCTAGAACCAGAGAAGCTTCTCACTCAGTTCAAGAAGGGAAAGGAAGGACCCTCAAGGGTAGGGACTTGCGCAGTGTCAGAAATTCCATTTGGAAGAAATTGGGGTTTGAAGATTGA | 552 | 0.4656 | MKEKSQNRERKKTEQHSMASRKGFLSKVSSMFASSSTDLEPKSTDGDLELDEADVFNWNMSNDYNNKNTVTESKKRPRSGKKKKVEGGGGKVNPVASSSMPVAIPDWSKILKEDFKEHEKRDFVSDDDDDHDHDRREPVPPHEYLARTREASHSVQEGKGRTLKGRDLRSVRNSIWKKLGFED* | 184 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso3g1525 | 183 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Gso3g1525 | 183 | MobiDBLite | consensus disorder prediction | 31 | 50 | - | - | |
| Gso3g1525 | 183 | MobiDBLite | consensus disorder prediction | 56 | 100 | - | - | |
| Gso3g1525 | 183 | MobiDBLite | consensus disorder prediction | 118 | 166 | - | - | |
| Gso3g1525 | 183 | PANTHER | ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MOK16 | 18 | 183 | - | - | |
| Gso3g1525 | 183 | Pfam | Senescence regulator | 8 | 183 | IPR007608 | - | |
| Gso3g1525 | 183 | PANTHER | EMB|CAB72159.1 | 18 | 183 | - | - | |
| Gso3g1525 | 183 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso3g1525 | Gso-Chr3 | 41128487 | 41129836 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso3g1525 | - | - | gmx:100786301 | 341.273 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso3g1525 | 3 | 41128487 | 41129836 | Gso3g1525 | 3 | 41128487 | 41129836 | ECH | |
| Gso19g1510 | 19 | 43943538 | 43944718 | Gso3g1525 | 3 | 41128487 | 41129836 | GST | |
| Gso3g1525 | 3 | 41128487 | 41129836 | Gso13g1079 | 13 | 25280812 | 25281990 | PCT | |
| Gso13g1079 | 13 | 25280812 | 25281990 | Gso3g1525 | 3 | 41128487 | 41129836 | PCT |