Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1079 ATGGCGTCAAGGAGGAGCTTTCTTTCAAACCCGAACCGTTACATCTTTCCGACAACCTCAGACACCCATTTGAGCCCATCCCAAGAGGGCAAGGGCATGTTCGAGTTGGACGAGGCCGAGTTATGGAACAACAACCACTCTTCAGCCACAACGGATCAGAGCAAAAAGGGGTTACCCTCTCCGGGTTCCCGTTCCGTTCTGAAGAAAGCTTCAAGGAACAACAACAATGGTTGGAGAGGTAGAATCACCCCAGCGTCATTGCCTGTGAACATACCCGATTGGTCCAAGATCTTGAAGGAGGACTACAAGGAGCACCCCAAGTGGGAGAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACAACAACGTTCGTGATGAACAAAACCATGGGCTCAGGAATATTAAGGTTCCCCCACATGAGTATTTGGCTAGGACAAGAGGTGCTTCTCTGTCGGTGCATGAAGGGATCGGAAGGACTCTCAAAGGAAGAGACTTGCGCAGTGTCAGAAATGCCATTTGGAAGAAAGTTGGTTTTGAAGATTAA 552 0.4819 MASRRSFLSNPNRYIFPTTSDTHLSPSQEGKGMFELDEAELWNNNHSSATTDQSKKGLPSPGSRSVLKKASRNNNNGWRGRITPASLPVNIPDWSKILKEDYKEHPKWESEEEEEEEEEEEEDNNVRDEQNHGLRNIKVPPHEYLARTRGASLSVHEGIGRTLKGRDLRSVRNAIWKKVGFED* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1079 183 PANTHER ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MOK16 1 183 - -
Gso13g1079 183 MobiDBLite consensus disorder prediction 41 81 - -
Gso13g1079 183 Pfam Senescence regulator 44 183 IPR007608 -
Gso13g1079 183 MobiDBLite consensus disorder prediction 110 125 - -
Gso13g1079 183 MobiDBLite consensus disorder prediction 1 90 - -
Gso13g1079 183 Coils Coil 109 132 - -
Gso13g1079 183 MobiDBLite consensus disorder prediction 103 143 - -
Gso13g1079 183 MobiDBLite consensus disorder prediction 1 27 - -
Gso13g1079 183 PANTHER EMB|CAB72159.1 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1079 Gso-Chr13 25280812 25281990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1079 - - gmx:100790091 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1510 19 43943538 43944718 Gso13g1079 13 25280812 25281990 PCT
Gso3g1525 3 41128487 41129836 Gso13g1079 13 25280812 25281990 PCT
Gso13g1079 13 25280812 25281990 Gso19g1510 19 43943538 43944718 PCT
Gso13g1079 13 25280812 25281990 Gso3g1525 3 41128487 41129836 PCT