Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1454 ATGGTTGAAACCGATATGGATGCCGAAACTGTTGCAAATGTGGTTCCACCAAAGGAGACTCCAAACAGTGTTCCCATCTCTTATCATTCCTCACACTCACACCCTCCTCTTAATGAGAGGATTATTTCATCCATGACCAGAAGATCTGTTGCTGCACACCCGTGGCACGACCTTGAGATAGGGCCTGGTGCTCCAACGATCTTCAATTGTGTGATTGAGATTGGGAAAGGGAGCAAGGTGAAATATGAACTGGACAAAAAATCGGGGCTTATCAAGATCGACCGTGTTCTTTACTCATCAGTTGTGTATCCTCACAATTATGGGTTTATCCCACGTACTATTTGTGAGGACAGTGATCCCCTGGATGTCTTGATTATTATGCAGGAGCCGGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAGGGGGAGAAAGATGATAAGATAATTGCTGTCTGTGCTGATGATCCCGAGTATCGACATTACAATGATATCAAGGAGCTTCCTCCACATCGTTTAGCTGAAATTCGTCGTTTTTTTGAAGACTACAAGAAGAATGAAAACAAGGAAGTCGCAGTAAACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCATGAGCTTGTATGCGGACTACATAGTGGAGAGCTTGAGACGGTAG 696 0.4483 MVETDMDAETVANVVPPKETPNSVPISYHSSHSHPPLNERIISSMTRRSVAAHPWHDLEIGPGAPTIFNCVIEIGKGSKVKYELDKKSGLIKIDRVLYSSVVYPHNYGFIPRTICEDSDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAFEAVNRSMSLYADYIVESLRR* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1454 231 PANTHER BNAC07G03580D PROTEIN 37 230 - -
Gso3g1454 231 MobiDBLite consensus disorder prediction 15 34 - -
Gso3g1454 231 CDD pyrophosphatase 67 219 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gso3g1454 231 SUPERFAMILY Inorganic pyrophosphatase 45 226 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gso3g1454 231 Hamap Inorganic pyrophosphatase [ppa]. 66 222 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gso3g1454 231 Gene3D Inorganic pyrophosphatase 49 227 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gso3g1454 231 ProSitePatterns Inorganic pyrophosphatase signature. 117 123 - -
Gso3g1454 231 Pfam Inorganic pyrophosphatase 70 221 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gso3g1454 231 PANTHER INORGANIC PYROPHOSPHATASE 37 230 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1454 Gso-Chr3 40524007 40527612 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1454 K01507 - gmx:100500040 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1444 19 43307009 43310856 Gso3g1454 3 40524007 40527612 GST
Gso3g1454 3 40524007 40527612 Gso10g0387 10 4104956 4108882 PCT
Gso10g0387 10 4104956 4108882 Gso3g1454 3 40524007 40527612 PCT