Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1444 ATGGTTGAAACCGAGATGGATGCAGAAACTGTTGCAAATGTGGTTCCACCAAAGGAGACTCCAAATAGTGTTTCCATTTCTCATCATTCCTCACACCCTCCCCTTAATGAGAGGATTATTTCATCCATGACCAGGAGATCTGTTGCTGCACACCCATGGCATGACCTTGAGATAGGACCTGGTGCTCCAATTATCTTCAATTGTGTGATTGAGATTGGGAAAGGGAGCAAGGTGAAATATGAACTGGACAAAAAGTCGGGGCTTATCAAGATCGACCGCGTGCTTTACTCATCAGTTGTTTATCCTCACAACTATGGGTTTATCCCTCGTACTATTTGTGAGGACAGTGATCCCCTGGATGTCTTGATTATTATGCAGGAGCCGGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAGGGGGAGAAAGATGATAAAATTATTGCTGTCTGTGCTGATGATCCTGAGTATAGACATTACAATGATATCAAAGAGCTTCCTCCACATCGTTTAGCTGAAATTCGTCGTTTTTTTGAAGACTACAAGAAGAATGAAAACAAGGAAGTTGCAGTAAACGACTTTTTGCCTGCCTCAGCTGCTTTTGAAGCGGTTAAGCGATCCATGAGCTTGTATGCGGATTACATAGTGGAGAGCTTGAGGCGGTAG 690 0.4391 MVETEMDAETVANVVPPKETPNSVSISHHSSHPPLNERIISSMTRRSVAAHPWHDLEIGPGAPIIFNCVIEIGKGSKVKYELDKKSGLIKIDRVLYSSVVYPHNYGFIPRTICEDSDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAFEAVKRSMSLYADYIVESLRR* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1444 229 PANTHER INORGANIC PYROPHOSPHATASE 35 228 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gso19g1444 229 SUPERFAMILY Inorganic pyrophosphatase 44 224 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gso19g1444 229 Gene3D Inorganic pyrophosphatase 47 225 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gso19g1444 229 PANTHER BNAC07G03580D PROTEIN 35 228 - -
Gso19g1444 229 MobiDBLite consensus disorder prediction 15 35 - -
Gso19g1444 229 CDD pyrophosphatase 65 217 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gso19g1444 229 Hamap Inorganic pyrophosphatase [ppa]. 64 220 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gso19g1444 229 ProSitePatterns Inorganic pyrophosphatase signature. 115 121 - -
Gso19g1444 229 MobiDBLite consensus disorder prediction 16 35 - -
Gso19g1444 229 Pfam Inorganic pyrophosphatase 68 219 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1444 Gso-Chr19 43307009 43310856 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1444 K01507 - gmx:100784203 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1444 19 43307009 43310856 Gso3g1454 3 40524007 40527612 GST
Gso19g1444 19 43307009 43310856 Gso10g0387 10 4104956 4108882 PCT
Gso10g0387 10 4104956 4108882 Gso19g1444 19 43307009 43310856 PCT