Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1431 ATGGCGGAGGCTCCTCCGTCTCTATTATCTGTGTGCATCGACGCTCTCACACAACAACTTCTCCGTCCATGCGATGATGATCTTCTTCCTTGTATCTACGATCTTCCTTCTCACTTACTCGACACCTTAATCACGCGTTTGCCCCCTTTCGCACTCCGCACATTCCACCACCACCTGCCATTCGACGAGGAAGGGTTTTCTCACGACGACTCAACCAAAAAGCGAAAACGCGCAAGGGATTGGAATTTAAATTCAGCTTGGCAGAGGTTGTTTCAGCTACGCTGGCCTGATCGCGTTAAGCAGATTCATAGAACGGATTGGGAGCAACTCTATTGGGAAACTCATTTGCAAGATTGTTTAGATGAAGCAGTGGAGGTAGCACTAATTCCATCTTTTACTGGATATATTGGTGACATACAGATTTCAGATAGCATACTGAAATATATTGGCTTTGTGGGGAATACAAACCATTCTACTTGTGACCATTCAAAATTGTCTTACCATTGCCTACAATTTGGCAGCCATGTGAGTTGCCTGGGGCTGCAAAATGTTCTATGTACTGCAGAAACTAGTGTTTTGTTGAGGGAATGCAAGCTACAGAGTCTGGTACTTAGATGTATCAGATCCAAGGAACAAATTGATGGATTATGCAAACTTCTTGCTCAACATTGTAGAACGTTAACGTCTCTGGAATTTGTTCACTGTGCACTCTCAACAGATTTTATTAATGCAATATTTGGCTCTTTAGTCATAGAGAGAGTACAAAAACATGGGATCCAACATTTGTCAATCATTGCCACAAGTTTTCTGGAACCATGTACAGTTTCTTTACCTAGTGGACTCGTGTCATTTTTGTCTTCGGGAAGGTCCTTGTGCTCATTAAAATTATCTGAGAACCACCATGGATGGACTTTTGCCAAAGATCTTTTTGTGACTCTTCTCAATCTTTCATCTGGCATATCTGTCCTTGACCTTTCTCGGAATAGAATATCAGGATGGCTTTTTTACTACAGGAGATCCTTGAGTGGTTCACATCTGTCGTTTGGAAATGGAAAGTCCTTGAAACTGTTGCGTGTACTCAATCTGAGGGAAAACAATTTAGGAAAAGATGATGTACAACATCTTAGATATGCTCTTGAACATGTGCCTAACTTGGAGGAGCTGGATATAAGTGACAATTCAATTGAAGATGAAGGAATCAGGAATTTAATTCCCTATTTTGTTGGAGCATCTGAAACCTGTCCTCGCATAACTTGTTTGAAATTAGAGAACTGTGATCTGTCCTGTGTTGGAGTGAATCTTCTCCTACATTACCTTTCTACTTTCAAAGGACCATTAAAGTCTCTTTCTATTGCTGAGAATTACCTTGGCAGACAAGTAGTTGAAGCATTGGGAAATTTTTTTCACACCCCAATCGAAGTACTTGACATTGCAGGCATTGGATTGGGTTCTGACGGTTTTCAAGAGCTTCAAAGTCTAATAAAAGAGGAGATTAAGCTGGTGAAAATTAATATAAGCAAAAATCGTGGTGGGACTGAAACTGCCAAATTTTTGTCCAAACTCTTGTCACAGGCTCCACAACTAGTTGATGTGAATGCAGCCTGTAATCTTATGCCAATAGAATCACTGGCCATCATCTGCTGTGCATTAAAGTTTGCAAAAGGTAATGTTCAGCAAGTGGACTTGACAGGACATATATGGGACTATAAGCCAGAGCATGTTTCCCCTTACGCTGAATTTGTACATAATGGATTACCTATATTGGTTCTTCCATCACCATCAGTCTCTGCTGCTCCTCACGACCATGATCCTTAG 1815 0.411 MAEAPPSLLSVCIDALTQQLLRPCDDDLLPCIYDLPSHLLDTLITRLPPFALRTFHHHLPFDEEGFSHDDSTKKRKRARDWNLNSAWQRLFQLRWPDRVKQIHRTDWEQLYWETHLQDCLDEAVEVALIPSFTGYIGDIQISDSILKYIGFVGNTNHSTCDHSKLSYHCLQFGSHVSCLGLQNVLCTAETSVLLRECKLQSLVLRCIRSKEQIDGLCKLLAQHCRTLTSLEFVHCALSTDFINAIFGSLVIERVQKHGIQHLSIIATSFLEPCTVSLPSGLVSFLSSGRSLCSLKLSENHHGWTFAKDLFVTLLNLSSGISVLDLSRNRISGWLFYYRRSLSGSHLSFGNGKSLKLLRVLNLRENNLGKDDVQHLRYALEHVPNLEELDISDNSIEDEGIRNLIPYFVGASETCPRITCLKLENCDLSCVGVNLLLHYLSTFKGPLKSLSIAENYLGRQVVEALGNFFHTPIEVLDIAGIGLGSDGFQELQSLIKEEIKLVKINISKNRGGTETAKFLSKLLSQAPQLVDVNAACNLMPIESLAIICCALKFAKGNVQQVDLTGHIWDYKPEHVSPYAEFVHNGLPILVLPSPSVSAAPHDHDP* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1431 604 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 3 604 - -
Gso3g1431 604 Gene3D Ribonuclease Inhibitor 166 572 IPR032675 -
Gso3g1431 604 ProSiteProfiles Leucine-rich repeat profile. 384 404 IPR001611 GO:0005515
Gso3g1431 604 SMART LRR_RI_2 382 409 - -
Gso3g1431 604 SMART LRR_RI_2 414 441 - -
Gso3g1431 604 SMART LRR_RI_2 354 381 - -
Gso3g1431 604 SMART LRR_RI_2 469 496 - -
Gso3g1431 604 SUPERFAMILY RNI-like 352 568 - -
Gso3g1431 604 Pfam Leucine Rich repeat 383 402 IPR001611 GO:0005515
Gso3g1431 604 SUPERFAMILY RNI-like 181 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1431 Gso-Chr3 40312337 40319446 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1431 - - gmx:100794405 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1422 19 43142885 43150127 Gso3g1431 3 40312337 40319446 GST