Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1422 ATGGCGGAGGCTCCTCCGTCTCTAATATCTCTGTGCATCGACGCTCTCGCACAACAATTTCTCCGTCCAAGCGATGATCTTCCTTCTATCTACGACCTTCCTTCTCACTTACTCCACACCTTAATCACGCGTTTGCCCCCTTTCGCACTCCGCACATTCCACCGCCACCACCTACCATTCGACGAGGAAGGGTTTTCTCGCGACGACTCCACGAAGAAGAGAAAACGCGCAAGGGATTGGAATTTAAGTTCAGCTTGGCAGAGGTTGTTTCTGCTACGCTGGCCTGATCGCGTTAAGCAGATTCAGCCAACGGATTGGGAGCAACACTATTGGGAAATTCATTTGCAAGATTGTTTAGATGAAGCGGCTGAGGTAGCACTAATTCCATCGTTTAGTGGATATATTGGTGACATACAGATTTCAGACAGCATACTGAAATATATTGGCTTTGTGGGGAATACAAGCCATTCAAGTTGTGACCATTCAAAATTGTCTTACCATTGCCTACAATTTGGCAGCCATGTGAGTTGTCTGATGCTGCAAAATGTTCTATGTACTGCAGAAACTAGTGTTTTGTTGAGGGAATGCAAGCTACAGAGTCTGGTACTAAGATGTATCCGATCCAAGGAACAAATTGATGGATTATGCAAACTTCTTGCTCAACATTGTAGAATGTTAACGTCTCTGGAATTTGTTCACTGCACACTCTCAACAGATTTTATTAATGCAATATTTGGTTCTTTAGTCATAGAGAGAGTACAAAAACATGGGATCCAACATTTGTCAATCATCGCCACAAGTTTTCTTGAACCATGTGCAGTTTCTTTACCTAGTGGACTCATGTCATTTTTGTCTTCGGGAAGGTCCTTGTGCTCATTAAAATTATCTGACAACCAACATGGACGGACTTTTGCCAAAGATCTTTTTGTGACTCTTCTCAATCTTTCATCTGGCATATCTGTCCTTGATCTTTCTGAGAATAGAATAGCAGGATGGCTTTCTGACTTTAACAGAAGATTTTTGAGTGGTTCACATATGTCTTTTGGAAATGGAAAGTCCTTGAAACTGTTGCGTGTACTCAATCTGAGGGAAAACAATTTAGGAAAAGATGATGTAGAAAGTCTTAGATATGCTCTTCAACATGTGCCTAACTTGGAGGAGCTGGACATCAGTGGCAATTCAATTGAAGATGAAGGAATCAGGAATTTAATTCCCTATTTTGTTGGAGCATCTGAAACGTGTCCTCACATAACTTGTTTGAAATTAGAGAACTGTGATCTGTCCTGTGTTGGAGTGAATAATCTCCTACATATCCTTTCTAATTTCAAAGGACCATTAAAGTCTCTTTCTATTGCTGACAATTACCTTGGCAGTCAAGTAGCTGAAGCATTGGGAAAATTTTTTAGCACCCCAATCGAAGTACTTGACATTGCAGGCATTGGATTGGGTTCTTACGGTTTTCAAGAGCTTCAAAGTCTAATAAAAGAGAAGGTTAAGCTGGTGAAAATTAATATAAGCAAAAATCGTGGTGGGATTGCAACTGCCAAATTTTTGTCTAAACTCTTGTCCCAGGCTCCACAACTAGTTGATGTGAATGCAGCCAGTAATCTTATGCCAATAGAATCACTGGCCATCATCTGCTCCGCGTTAAAGTTTGCAAAAGGTAATGTTCAGCAAGTGGACTTGACAGGACATATATGGGACTATAAGCCAGAGCATGTTTCCCCTTACACTGAATTTGTACATAATGGATTACCTATATTGATTCTTCCATCATCATCAGCCTCTGCTGCACCTCACGACCATGATCCTTAG 1815 0.4116 MAEAPPSLISLCIDALAQQFLRPSDDLPSIYDLPSHLLHTLITRLPPFALRTFHRHHLPFDEEGFSRDDSTKKRKRARDWNLSSAWQRLFLLRWPDRVKQIQPTDWEQHYWEIHLQDCLDEAAEVALIPSFSGYIGDIQISDSILKYIGFVGNTSHSSCDHSKLSYHCLQFGSHVSCLMLQNVLCTAETSVLLRECKLQSLVLRCIRSKEQIDGLCKLLAQHCRMLTSLEFVHCTLSTDFINAIFGSLVIERVQKHGIQHLSIIATSFLEPCAVSLPSGLMSFLSSGRSLCSLKLSDNQHGRTFAKDLFVTLLNLSSGISVLDLSENRIAGWLSDFNRRFLSGSHMSFGNGKSLKLLRVLNLRENNLGKDDVESLRYALQHVPNLEELDISGNSIEDEGIRNLIPYFVGASETCPHITCLKLENCDLSCVGVNNLLHILSNFKGPLKSLSIADNYLGSQVAEALGKFFSTPIEVLDIAGIGLGSYGFQELQSLIKEKVKLVKINISKNRGGIATAKFLSKLLSQAPQLVDVNAASNLMPIESLAIICSALKFAKGNVQQVDLTGHIWDYKPEHVSPYTEFVHNGLPILILPSSSASAAPHDHDP* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1422 604 SUPERFAMILY RNI-like 185 568 - -
Gso19g1422 604 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 3 604 - -
Gso19g1422 604 Pfam Leucine Rich repeat 383 402 IPR001611 GO:0005515
Gso19g1422 604 Gene3D Ribonuclease Inhibitor 162 335 IPR032675 -
Gso19g1422 604 Gene3D Ribonuclease Inhibitor 336 568 IPR032675 -
Gso19g1422 604 ProSiteProfiles Leucine-rich repeat profile. 384 404 IPR001611 GO:0005515
Gso19g1422 604 SMART LRR_RI_2 414 441 - -
Gso19g1422 604 SMART LRR_RI_2 354 381 - -
Gso19g1422 604 SMART LRR_RI_2 382 409 - -
Gso19g1422 604 SMART LRR_RI_2 497 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1422 Gso-Chr19 43142885 43150127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1422 - - gmx:100817679 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1422 19 43142885 43150127 Gso3g1431 3 40312337 40319446 GST