Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1421 ATGGCTGCAGATTCCAACTCAAACCTTAGAATCTCCATTGAAAGAAACCCTTCCCAGTCACGCCTTGCTGAGTTGAACATCAAGTGCTGGCCTAAGTGGGGTTGCTCTCCAGGGAAGTACCAGTTGAAGTTTGATGCAGAAGAGACATGCTACTTGGTGAAAGGGAAGGTGAAGGCATACCCAAAAGGGTCATCAGAGTTTGTGGAGTTTGGTGCTGGGGACCTTGTCACAATTCCAAAAGGACTCAGTTGCACTTGGGATGTGTCTGTTGCCGTGGATAAGTACTACAAGTTTGAATCCAATTCTTCTTCTTCTACTACTTCATCATCATCTTGTTAA 339 0.4513 MAADSNSNLRISIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLVKGKVKAYPKGSSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESNSSSSTTSSSSC* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1421 112 SUPERFAMILY RmlC-like cupins 20 96 IPR011051 -
Gso3g1421 112 Gene3D Jelly Rolls 2 98 IPR014710 -
Gso3g1421 112 PANTHER OS04G0445200 PROTEIN 2 105 - -
Gso3g1421 112 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Gso3g1421 112 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 2 105 - -
Gso3g1421 112 CDD cupin_TM1112-like 30 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1421 Gso-Chr3 40171176 40172394 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1421 - - gmx:100793722 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1421 3 40171176 40172394 Gso10g0355 10 3722805 3723794 PCT
Gso10g0355 10 3722805 3723794 Gso3g1421 3 40171176 40172394 PCT