Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0355 ATGGCTTCAGATTCCAATTCATCAAACCTTAGAATCACCATTGAAAGCAATCCTCCCGAGTCACGCCTAGCCGAATTGAACATCAAGTATTGGCCAAAATGGGGTTGTTCTCCAGGGAAGTACCAATTGAAGTTTGATGCTGAAGAAACATGCTATTTGCTGAAAGGGAAGGTGAAGGCATATCCAAAAGGGTCATCAGAGTTTGTAGAGTTTGGTGCTGGAGACCTTGTGACCATACCAAGGGGACTCAATTGCACTTGGGATGTGTCAGTTGCTGTGGACAAGTGCTACAAATTCGAGTCATCAAATTCTTCTTCATCATCTTCTTCCTAG 333 0.4354 MASDSNSSNLRITIESNPPESRLAELNIKYWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGAGDLVTIPRGLNCTWDVSVAVDKCYKFESSNSSSSSSS* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0355 110 Pfam EutQ-like cupin domain 24 97 IPR008579 -
Gso10g0355 110 Gene3D Jelly Rolls 2 99 IPR014710 -
Gso10g0355 110 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 1 106 - -
Gso10g0355 110 SUPERFAMILY RmlC-like cupins 23 97 IPR011051 -
Gso10g0355 110 CDD cupin_TM1112-like 31 99 - -
Gso10g0355 110 PANTHER OS04G0445200 PROTEIN 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0355 Gso-Chr10 3722805 3723794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0355 - - gmx:100795642 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1421 3 40171176 40172394 Gso10g0355 10 3722805 3723794 PCT
Gso10g0355 10 3722805 3723794 Gso3g1421 3 40171176 40172394 PCT