Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1420 ATGGCGGATTTAGAAAATTTGCTTTTGGAGGCAGCGGGGAGAACACGACATTCTTGTCAACCTTCAAGAAGAGGACATGGTGGTGGTGGTGGCAGTGACTCTAGGGAGGATGATTCGGAGGATGAACATGATTATTCAGGTCGGAAGCCCTCTAGCTTGCAAGTTCCCCTAAAGAAGAGGTTTGATCCAATCGAACGAGATGATGGTGAGAGAAGTAAGGATGAAGGGGATGATGATGTTGGTGGCCGATGTTATCACGAGGGCGATAGCAGTGATGAATCTGATTTTGGTGATGATCTTTATAAGAATGAAGATGACAGGCTTAATCTGTCGGAGATGACTGAACTTCAAAGAGAGATGATATTGTCAGAAAGGGCTACCAAGAAGCATGATAAATATTTCTTGGGGAAGATAGCATCAAAGCGTGAGAAGGGAAAGAAAACTGTAGCCGGGAAACAGACTTCACCTCTCCCGCCATCTCGTGTGCGTTCATCAGCCAGATCTGCCGACAGGTCAACTGCCAAGGATGGTGCATTAAATGAATTGCGTGCAAAACGGTTAAAGCAGCAAGATTCAGAAGCAAACCGCAGGCCAAGTGAGGCATCTAGAAGTTCAGGGCCTGGGCATTTTTCACCAAAGCACAAACCTTTCCCAAATCTCAGTAGCTCAAGTGATAGTGAAACTGAAAGTAAGTCCCTGAGTGATAATGAAGGGTTGAGTGATGACGACAGAATCATCGACAGTGATGATGACAGGATAATGTTAGGATCTGAAGGGCTTTCATTTGAGGATATAAAAGAAATCACCATTCGGAGATCAAAACTTGCAAAATGGTTTATGGAGCCTTTTTTTGAGGAGTTAATTGCTGATTGTTTTGTAAGAGTTGGTATTGGTCGCCCAAAGTCAGGGCCTATCTACAGGCTCTGCATGGTAAAAAATGTTGATGCCAGAGATCGTGCTCGGCAGTATAAATTAGAAAATAAAACCACACACAAGTACTTAAATCTTGTCTGGGGAAATGAAACTTCTGCTGCAAGGTGGCAAATGGCTATGATTAGCGACTCTCCTCCAAAGGAGGAAGAGTTCATCCAGTGGGTTAAGGAAGTAGAGAGAAGAGGTGGCCGGATGCCAACAAAGCAAGAAGTGGCAGAAAAAAAAGAAGCTATACTAAAGACCAACTTGTTTGTTTACTCAGCAGCTACTGTGAAGCAGATGTTACAAGAGAAAAAATCTGCCAAAACAAGACCACTAAATATTGCAGCTGAGAAGGATAGGTTAAGGACAGAATTGGAAATAGCACATAGTAAGAATAGTAAAGCTGAAGTGAAGAGGATCATGACAAGATTGGAAGAATTGGAGGAATCACGGAAAGCTAAGAGGATGGATGCCAGGGCTTTGAAGCTTGCTGAGATGAATAGAAAGAACAGGTTTGAGAACTTCAAAAATGCTTCTGAATTGAAGCCAGTAAATAAAGAATTGAAAGCAGGGGAGGCAGGTTATGATCCTTTTTCAAGGAGATGGACTAGATCAAGGAATTACTACTCTGGAAAACCAGCTGAAGAGGGTGCAGCTGAAAATAATAGTGCAGGTGGTGATACAGGCAGCTACCACACAGGAGCAGCTGAGACCGTGATGGCTGGTACGGCAGCTACTACTGCAGCTTTGAAAGCTGCTGCCGGTGCTGGGAAGTTAGTAGACACAAGCGCTCCGGTGGATCAAGCCACAGAGTCAAATGTGCTGCACAATTTTGAGCTGCCAATATCATTGGCTACACTCCAAAACTTTGGTGGAGCCAAAGGAGTTCAGGCAGGATATATGGCAAAGAAACAAAGAATAGAAGCAACAGCTGGATTTAAAGTCCTGGAAAATGATCGTCAGAAGCATGCGCTGACATTAACAGTTAGTGATTACAAGAGAAGAAGAGGGCTAATTTGA 1935 0.4367 MADLENLLLEAAGRTRHSCQPSRRGHGGGGGSDSREDDSEDEHDYSGRKPSSLQVPLKKRFDPIERDDGERSKDEGDDDVGGRCYHEGDSSDESDFGDDLYKNEDDRLNLSEMTELQREMILSERATKKHDKYFLGKIASKREKGKKTVAGKQTSPLPPSRVRSSARSADRSTAKDGALNELRAKRLKQQDSEANRRPSEASRSSGPGHFSPKHKPFPNLSSSSDSETESKSLSDNEGLSDDDRIIDSDDDRIMLGSEGLSFEDIKEITIRRSKLAKWFMEPFFEELIADCFVRVGIGRPKSGPIYRLCMVKNVDARDRARQYKLENKTTHKYLNLVWGNETSAARWQMAMISDSPPKEEEFIQWVKEVERRGGRMPTKQEVAEKKEAILKTNLFVYSAATVKQMLQEKKSAKTRPLNIAAEKDRLRTELEIAHSKNSKAEVKRIMTRLEELEESRKAKRMDARALKLAEMNRKNRFENFKNASELKPVNKELKAGEAGYDPFSRRWTRSRNYYSGKPAEEGAAENNSAGGDTGSYHTGAAETVMAGTAATTAALKAAAGAGKLVDTSAPVDQATESNVLHNFELPISLATLQNFGGAKGVQAGYMAKKQRIEATAGFKVLENDRQKHALTLTVSDYKRRRGLI* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1420 644 MobiDBLite consensus disorder prediction 153 167 - -
Gso3g1420 644 ProSiteProfiles Plus3 domain profile. 259 394 IPR004343 GO:0003677
Gso3g1420 644 Pfam Plus-3 domain 264 369 IPR004343 GO:0003677
Gso3g1420 644 MobiDBLite consensus disorder prediction 29 48 - -
Gso3g1420 644 PANTHER UNCHARACTERIZED 1 644 - -
Gso3g1420 644 SUPERFAMILY Plus3-like 261 389 IPR036128 GO:0003677
Gso3g1420 644 MobiDBLite consensus disorder prediction 121 246 - -
Gso3g1420 644 MobiDBLite consensus disorder prediction 230 246 - -
Gso3g1420 644 MobiDBLite consensus disorder prediction 1 102 - -
Gso3g1420 644 MobiDBLite consensus disorder prediction 59 102 - -
Gso3g1420 644 Coils Coil 423 469 - -
Gso3g1420 644 PANTHER PLUS-3 DOMAIN PROTEIN 1 644 - -
Gso3g1420 644 SMART rtf1 259 371 IPR004343 GO:0003677
Gso3g1420 644 Gene3D - 260 391 IPR036128 GO:0003677
Gso3g1420 644 MobiDBLite consensus disorder prediction 121 149 - -
Gso3g1420 644 MobiDBLite consensus disorder prediction 168 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1420 Gso-Chr3 40163539 40166730 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1420 K15178 - gmx:100793184 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1415 19 42997492 43000431 Gso3g1420 3 40163539 40166730 GST