Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1415 ATGGCGGATTTAGAAAATTTGCTTTTGGAGGCGGCGGGGAGAACACGCCATTCTCGTCAAACTTCAAGAAGAGGACATGGCGATGGTGGGAGTGACTCTAGGGATGATGATTCGGAGAATGAACATGATTATCCAGGTCGAAAGGCCTCTGGCTTGCAAGTTCCCCAAAAGAAGTGGTTTGATCCAATGGAAAGAGATGATGGTGAGAGAAGTAAGGATGAAGGGGATGATGATGTTGGTGGCCGGTCTTATCACGAGGGTGATAGTAGTGATGAATCTGATTTTGGTGATGATCTTTATAAGAATGAGGATGACAGGCATAAGCTTTCTGAGATGACTGAACTTCAAAGAGAGATGATATTGTCAGAAAGGGCTACCAAGAAGCATGATAAAGATTTATTGGGGAAGATAGCATCAAAGCGTGAGAAGGGAAAGACAACTGTAGCCGGGAAACTGACTTCACCTCTCACACCATCCCATGTGCGTTCATCAGCCAGATCTGCCAACAGGTCAACTGCCAAGGATGGTGCATTAAATGAATTGCGTGCGAAACGGTTAAAGCAGCAGGATTCAGAAGCAAACCGCAGGCCAAGTAAGGCATCTAGAAGTTCAGGGCCTGGGCTTGTTTCACCAAAGCACAGACCTTTCCCAAGTCTTGGTAGCTCAAGTGATAGTGAAACTGAAAGTAAGTCCCTGAGTGATAATGAAGGGTCAAGTGATGACGACAGAATCATTGATAGTAATGATGACAGGATAATGCTAGGATCTGAAGGGCTTTTATTTGAGCATATAAAAGAAATCACCATTCGGAGATCAAAACTTGCAAAATGGTTTATGGAGCCCTTTTTTGAGGAGTTAATTGCTGGTTGTTTTGTAAGAGTTGGTATTGGTCGCTCAATGTCAGGGCCTATCTACGGGCTCTGCATGGTAAAAAATGTTGATGCCACAGATTGTGATCAGCAGTATAAATTAGAAGATAAAACCACACACAAATACTTAAATGTTGTCTGGGGAAATGAAACTTCTGCAACAAGGTGGCAAATGGCTATGGTTAGCGACTCTCCTCCAGAGGAGGAAGAGTTCATCCAGTGGGTTAAGGATGTAGAGCGAAGAGGTGGCCGGATGCCAACGAAGCAAGAAGTGGCAGAAAAAAAAGAAGCTATACAAAAGACCAACTTGTTTGTTTACTCAGCAGCTACTGTGAAGCAAATGTTACAAGAGAAAAAATCTGCCAAAACAAGACCACTAAATATTGCAGCTGAGAAGGATAGGTTAAGGACTGAATTGGAAATAGCACATAGTAAGAATAATAAAGCTGAAGTGAAGAGGATCATGACAAGATTGCTAGAATTGGAGGAATCTCGGCAAGCTAAGACGATGGATGCCAGGGCTTTGAAGCTTGCTGAGATGAATAGAAAGAACAGGTTTGAGAACTTCAAAAATGCTTCTGAATTGAAGCCAGTAAATAAAGAATTGAAAGCAGGGGAGGCAGGTTATGATCCCTTTTCAAGGAGATGGACTAGATCAATGAATTACTACGCAGGAAAACCAGCTGAAGAGGCTGCAGGTGAAATTAATAGTGCCAGTGGTGCAGTGGCTGATACAGGCAGCTACCACACGGGAGCATCTGAGACCGTGACGGCTGGTATGGCAGCTACTACTGCAGCTTTGAAAGCTGCTGCCGGTGCTGGGAAGTTAGTAGACACAAGCGCCCCTGTGGATCAAGGGACAGAGTCAAATTCGCTGCACAATTTTCAGCTGCCAATATCATTAGCTATACTCCAAAAGTTTGGTGGAGCTAAAGGAGTTCAGGCAGGATTTATGGCAAAGAAACAAAGAATAGAAGCAACAGTGGGATTTCAAGTCCTGAAAAATGATCGTCAGAAGCATGCACTGACATTAACAGTTAGTGATTACAAGAGAAGAAGAGGGCTTCTATGA 1941 0.4359 MADLENLLLEAAGRTRHSRQTSRRGHGDGGSDSRDDDSENEHDYPGRKASGLQVPQKKWFDPMERDDGERSKDEGDDDVGGRSYHEGDSSDESDFGDDLYKNEDDRHKLSEMTELQREMILSERATKKHDKDLLGKIASKREKGKTTVAGKLTSPLTPSHVRSSARSANRSTAKDGALNELRAKRLKQQDSEANRRPSKASRSSGPGLVSPKHRPFPSLGSSSDSETESKSLSDNEGSSDDDRIIDSNDDRIMLGSEGLLFEHIKEITIRRSKLAKWFMEPFFEELIAGCFVRVGIGRSMSGPIYGLCMVKNVDATDCDQQYKLEDKTTHKYLNVVWGNETSATRWQMAMVSDSPPEEEEFIQWVKDVERRGGRMPTKQEVAEKKEAIQKTNLFVYSAATVKQMLQEKKSAKTRPLNIAAEKDRLRTELEIAHSKNNKAEVKRIMTRLLELEESRQAKTMDARALKLAEMNRKNRFENFKNASELKPVNKELKAGEAGYDPFSRRWTRSMNYYAGKPAEEAAGEINSASGAVADTGSYHTGASETVTAGMAATTAALKAAAGAGKLVDTSAPVDQGTESNSLHNFQLPISLAILQKFGGAKGVQAGFMAKKQRIEATVGFQVLKNDRQKHALTLTVSDYKRRRGLL* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1415 646 Coils Coil 422 442 - -
Gso19g1415 646 SMART rtf1 258 370 IPR004343 GO:0003677
Gso19g1415 646 Gene3D - 260 391 IPR036128 GO:0003677
Gso19g1415 646 SUPERFAMILY Plus3-like 261 390 IPR036128 GO:0003677
Gso19g1415 646 MobiDBLite consensus disorder prediction 177 197 - -
Gso19g1415 646 MobiDBLite consensus disorder prediction 59 147 - -
Gso19g1415 646 PANTHER PLUS-3 DOMAIN PROTEIN 1 646 - -
Gso19g1415 646 MobiDBLite consensus disorder prediction 229 246 - -
Gso19g1415 646 MobiDBLite consensus disorder prediction 1 246 - -
Gso19g1415 646 MobiDBLite consensus disorder prediction 22 46 - -
Gso19g1415 646 Pfam Plus-3 domain 264 368 IPR004343 GO:0003677
Gso19g1415 646 ProSiteProfiles Plus3 domain profile. 258 393 IPR004343 GO:0003677
Gso19g1415 646 MobiDBLite consensus disorder prediction 150 174 - -
Gso19g1415 646 PANTHER UNCHARACTERIZED 1 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1415 Gso-Chr19 42997492 43000431 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1415 K15178 - gmx:100817324 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1415 19 42997492 43000431 Gso3g1420 3 40163539 40166730 GST