Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1418 ATGGACTCAAAAGAAGAGGCCGAACATCATGAGGATAGGCCAACATCGCCAATGCGGGTCCTGCAGCAGTTATCTGAAGGGGCATTCAGAGTTGCTGGGGAAGCATTTCACAATATGTATTCTGGTGGTGGGTCAAGTATGCCACAAATGGGGCCTGGTGCACATAGACGATGTCAAAGTGAACTTGTTACTAGAGAAGGAGTTCAGCGTAATAATAGCTTTCAGAAATTAAGATCTCATGTGCACAAGGCTTGGCGGTGGGGTGGCAGATTCCGCGAAGAAGTTTCACCGGCGAGTTTCAACCCTGAGGTCATGGCCAACCAGAAACGGCAGTGGTATCGGCTTCATCCTAAAAATCTGGATTGTGTAAATTATAAGGAGCCAGAATCGCTCTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAGCCGTGGAGCATGCATTTGCAAGAAGGAAAAAGTGGGAAAAGGAAAAACCTGCATCTCTAGATTACAAAATGTTACAGCAACAAAGGCCACCGGAACCAACTTTGGAACCTCAGTTACTGTTCAAATATCCTCCTGCAAAGAAGCTAACAATGAGTAAGAAGGATTTAGCTCCCTTTTGCTTTCCTGAAGGTGTTAAGGCATGGTTGTTGGAGAGGACTCCATCTCTAAGCGAACTAAATGAACTTGTCTATGGACAGGAGCATTTAGGAAAAGATGATCTTTCATTTGTCTTTACAATCAAGGCAGCAGACAATGCAACACTTTATGGAGTTTGCTTACATGTGCCTGAAATTGTTCAGAGGCCCCCTGGTATCTTAGGCATATCATCTCCTTTTTCTCATCCCTCTGGGGCATGCAGCCGCTTTCTGGTTTCTGCACCTCGCTGTTACTGTCTTCTAACTAAAGTTCCTTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTCATTGCACAAGAGCGCCTGAATCGGATAACTCAGTTTATAAATGAGGTGACTCTCACTGGCAGCACTCCATCAACACCCAAATTAGATGATCAAATGAGTTCAAATGCTAACTCCCCGGATAGGGAGTCATTCAGTGACTGGATGGATTGTGCAATACCCCTTGATGCTGCAGCTGTTATTACTGCTGCTGCTGCGGGGATTATATCTGATGATGAAATCATACAGTTGTCCCCTAAAAGATGGGATTCTCGCTGTCAATCTCCTGTAAGTGTGACCGCCAGTGATGCTTCAGATCATTGGCAGGTCAGGGATATAGATAAGGATGGCAGGAAGAATCTACAAGATCATGATAATTGTACTTTTGGGGCACCAGAAACTCTTGGTTCTATAGAAAGAATGCATGGAAATTACAAAAATGACCAAGTTTCTCCGAAAGTTGGAACACCTTTTTCTGCTCAGAATCGTGTCTTGGAGCGTCTTGGAAGTTCCGAATCACTTTTCAGTCCAGTTAGAAGCATGGCATCAGAAGATGAGGACGATTTTTTCTCAAACAATGAAAGAGATTACGGGGACGAATTGTTAATAGAATGGGCCATGGAAAATAAGAATGATTTGCTACAGATAGTGTGTAGATATCATGCTGAACCTATTCCACCTCGAGGAAGTGAATTTGTCTTCCACCCTCTCGAACATCTACAGGCTATTCAGTACATACGACATTCAGTTGCTTCACTTGGCTTCGGGGATGATTGTTCAAATTGTTCTGAACCAGCTCTGGACAATGCAAAGCTGGCAGCTGCTGAGGAAGCCCTGTCATTATCAGTATGGACAATGGCAACTACTTGTCGAGTTCTGTCCCTTGATAGTGTGATGGCATTAATTACAGGAGTGTTGTTGGAAAAACAGGTGGTAATAATGTGTCCAAATCTGGGTGTTCTATCTGCCACAGTGCTTTCTCTGATTCCCATGATTCGTCCATTTCAGTGGCAGAGTTTATTGCTCCCGGTTTTACCTGGGAAAATGATTGATTTTCTTGATGCCCCAGTTCCATATATTGTTGGCATACAACATAAACCTGATGACTTGAATATGAAAACTAAGAATCTTGTTCTTGTTAATATGCCAAAGGATCAGGTTACAATGTGTCACTTACCAAGACTTCCACGACATAGAGAGCTTCTCTCTCAGTTGACTCCAATTCATGCTAGACTTTCAAATGAAAGATCAATTGCTAGAAAGCATCCTGTACATAGGTGCAACGAAGTCCAGGCTGAAGCTTCAACTCAGTTTTTGAATATAATGTGGCACTATTTGGAGTCACTTTGTTCAGATCTGAAATCTCACACGATCACTAGTGTACAATCAAATAACGACAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGATTCATTTCCTGCAAGGGACCAGCCATTCATTAAGCTATTTGTAGATACACAGCTCTTCACTGTTTTATCAGACTCTCGTTTGTCAAGCTTTGAGAGTGGTGAGTCATAG 2466 0.4262 MDSKEEAEHHEDRPTSPMRVLQQLSEGAFRVAGEAFHNMYSGGGSSMPQMGPGAHRRCQSELVTREGVQRNNSFQKLRSHVHKAWRWGGRFREEVSPASFNPEVMANQKRQWYRLHPKNLDCVNYKEPESLFEHFVIVGLHPDANLEAVEHAFARRKKWEKEKPASLDYKMLQQQRPPEPTLEPQLLFKYPPAKKLTMSKKDLAPFCFPEGVKAWLLERTPSLSELNELVYGQEHLGKDDLSFVFTIKAADNATLYGVCLHVPEIVQRPPGILGISSPFSHPSGACSRFLVSAPRCYCLLTKVPFFELHFEMLNSLIAQERLNRITQFINEVTLTGSTPSTPKLDDQMSSNANSPDRESFSDWMDCAIPLDAAAVITAAAAGIISDDEIIQLSPKRWDSRCQSPVSVTASDASDHWQVRDIDKDGRKNLQDHDNCTFGAPETLGSIERMHGNYKNDQVSPKVGTPFSAQNRVLERLGSSESLFSPVRSMASEDEDDFFSNNERDYGDELLIEWAMENKNDLLQIVCRYHAEPIPPRGSEFVFHPLEHLQAIQYIRHSVASLGFGDDCSNCSEPALDNAKLAAAEEALSLSVWTMATTCRVLSLDSVMALITGVLLEKQVVIMCPNLGVLSATVLSLIPMIRPFQWQSLLLPVLPGKMIDFLDAPVPYIVGIQHKPDDLNMKTKNLVLVNMPKDQVTMCHLPRLPRHRELLSQLTPIHARLSNERSIARKHPVHRCNEVQAEASTQFLNIMWHYLESLCSDLKSHTITSVQSNNDRVSLLLKDSFIDSFPARDQPFIKLFVDTQLFTVLSDSRLSSFESGES* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1418 821 ProSiteProfiles Tripartite DENN domain profile. 165 819 IPR037516 -
Gso3g1418 821 Pfam uDENN domain 184 262 IPR005113 -
Gso3g1418 821 SMART DENN_cls 292 693 IPR001194 -
Gso3g1418 821 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 25 818 - -
Gso3g1418 821 Pfam DENN (AEX-3) domain 592 691 IPR001194 -
Gso3g1418 821 SMART uDENN_cls 128 263 IPR005113 -
Gso3g1418 821 Gene3D - 590 756 IPR043153 -
Gso3g1418 821 MobiDBLite consensus disorder prediction 339 358 - -
Gso3g1418 821 Gene3D - 120 341 - -
Gso3g1418 821 PANTHER BNAA09G10210D PROTEIN 25 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1418 Gso-Chr3 40144603 40154628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1418 - - gmx:100791254 1635.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1413 19 42980855 42990629 Gso3g1418 3 40144603 40154628 GST