Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1413 ATGGACTCAAAAGAAGAGGCTGAACCTCATGAGGATAGGCCCACATCGCCAATGCGGGTCCTGCAGCAATTATCTGAAGGGGCATTCAGAGTTGCTGGGGAAGCATTTCACAATATGTATTCGGGTGGTGGGTCAAGCAAATCACAAATGGGGCCTGGTGCACATAGACGAAGTCAAAGTGAACTTGTTACTAGAGGAGTTGAGCGTACTAATAGCTTTCAGAAATTAAGATCTCATGTGCATAAGGCTTGGCGGTGGGGTGGCAGATTCCGCCAAGAAGTTTCCCCGGCGAGTTTCAACCCGGAGGTCATGGCCAACCAGAAACGGCAGTGGTATCAGCTTCATCCTAGAAGTCTGGGTTGTGTACATTATAAGGAGCCAACATCGCTCTTTGAACATTTTTTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAGATGTGGAGCATGCATTTGTAAGAAGGAAAAAGTGGGAAAAGGAAAAACCTGAATTTCTAGATTACAAAATGTTACAGCAACAAAGGCCACCAGAACCAACATTGGAACCTCAGTTGCTATTCAAATATCCTCCTGCAAAGAAACTAACAATGCGTATGAAGGATTTAGCTCCCTTTTGCTTTCCTGAAGGTGTTAAGGCATGGCTGTTGGAGAGGACTCCGTCTCTAAGTGAACTAAATGAACTTGTCTATGGACAGGAGCATTTAGGAAAAGATGATCTTTCATTTGTCTTTACAATCAAGGCAGCAGACAATACAACACTTTATGGAGTTTGCTTACATGTGCCTGAAATTGTTCAGAGGCCCCCTGGTATCTTAGGCATATCATCTCCTTTTTCTCATCCCTCTGGGGCATGCAGCCGTTTTCTGGTTTCTGCACCTCGCTGTTACTGTCTTCTGACTAGAGTTCCTTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTCATTGCACAAGAGCGCCTGAATAGGATAACTCAGTTTATAAATGAGGTGACAATCACTGGCAGCACTCCATCAACACCCAAACTAGGTGATCAAATGAGTTCGAATGCTAACTCTCCGGATAGAGAGTCATTTAGTGACTGGATGGATTGTGCAATACCCCTTGATGGTGCAGCTATTATTACTGCTGCTGCTGCAGGGATTATATCTGATGATGAAATCATACAGTTATCACCTAAAATATGGGATTCTCGCTGTCAATCTCCTGTAAGTGTGACTGCCAGTGATGCTTCAGATTATTGGCAGGTTAGGGATGTAGACAAGGATGGCAGGAAGAATCTGCAAGATCATGATAATTGTGCTTTTGAGGCCCCAGAAAATCTTGGTTCTATAGAAAGAATGCATGGAATTTGCGAAAATGACCAAGTTTCTCCAAAAGTTGGAACACCTTTTTCTGCTCGGAGTCGTGTCTTGGAGCGTCTTGGAAGTTCCGAATCACTTTTCAGTCCAGTTAGAAGCATGGCATCAGATAACGAGGAAGATTTTTTCTCAAACAATGAAAGAGATTACGGGGACGAATTGTTAATGGAATGGGCCATGGAGAATAAGAATGATTTGCTACAGATAGTGTGTAGATATCATGCTGAACCTATTCCACCTCGAGGAAGTGAATTAGTCTTCCACCCTCTCGAACATTTACAAGCTATTCAGTACATACGACATTCAGTTGCTTCTCTTGACTTCAGCAATGATTGTTCAAATTGTTCTGAACCAGCTCAGGACAATGCAAAGCTGGCAGCTGCCGAGGAAGCCCTGTCATTATCAGTATGGACGATGGCAACTACTTGTCGAGTTCTGTCCCTTGATAGTGTGCTGGCATTAATTACAGGAGTTTTGTTGGAAAAACAAGTGGTAATAGTGTGCCCAAATCTGGGTGTTCTATCTGCCACTGTGCTTTCTCTTATTCCCATGATTCGTCCATTTCAGTGGCAGAGTTTATTGCTCCCTGTTTTACCTGGGAAAATGATTGATTTTCTTGATGCCCCAGTTCCATATATTGTTGGCATACAACATAAACCAGATGACTTGAATATGAAAACTACTAATCTTGTTCTTGTTAATATACCAAAGGATCAGATTACAATGTGTCACTTACCAAGACTTCCACAACATAGAGAGCTTCTCTCTCAGTTGACTCCAATTCATGCTAAACTTTCAAATGAAAGATCAATTGCTAGAAAGCATCCTGTACATAGGTGCAACGAAGTACAGGCTGAAGCTGCAACACAGTTTTTGAATATAATGTGGCACTATTTGGAATCACTCTGCTCAGATCTGAAATCTCACACGATCACTAGTGTACAATCAAATAACGACAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGATTCATTTCCTGCAAGGGACCAGCCATTCATTAAGCTATTTGTAGATACACAGCTCTTCACTGTTTTATCAGACTCACGTTTGTCAAGCTTTGAGAGTGGCGAGTCATAG 2463 0.4222 MDSKEEAEPHEDRPTSPMRVLQQLSEGAFRVAGEAFHNMYSGGGSSKSQMGPGAHRRSQSELVTRGVERTNSFQKLRSHVHKAWRWGGRFRQEVSPASFNPEVMANQKRQWYQLHPRSLGCVHYKEPTSLFEHFLIVGLHPDANLEDVEHAFVRRKKWEKEKPEFLDYKMLQQQRPPEPTLEPQLLFKYPPAKKLTMRMKDLAPFCFPEGVKAWLLERTPSLSELNELVYGQEHLGKDDLSFVFTIKAADNTTLYGVCLHVPEIVQRPPGILGISSPFSHPSGACSRFLVSAPRCYCLLTRVPFFELHFEMLNSLIAQERLNRITQFINEVTITGSTPSTPKLGDQMSSNANSPDRESFSDWMDCAIPLDGAAIITAAAAGIISDDEIIQLSPKIWDSRCQSPVSVTASDASDYWQVRDVDKDGRKNLQDHDNCAFEAPENLGSIERMHGICENDQVSPKVGTPFSARSRVLERLGSSESLFSPVRSMASDNEEDFFSNNERDYGDELLMEWAMENKNDLLQIVCRYHAEPIPPRGSELVFHPLEHLQAIQYIRHSVASLDFSNDCSNCSEPAQDNAKLAAAEEALSLSVWTMATTCRVLSLDSVLALITGVLLEKQVVIVCPNLGVLSATVLSLIPMIRPFQWQSLLLPVLPGKMIDFLDAPVPYIVGIQHKPDDLNMKTTNLVLVNIPKDQITMCHLPRLPQHRELLSQLTPIHAKLSNERSIARKHPVHRCNEVQAEAATQFLNIMWHYLESLCSDLKSHTITSVQSNNDRVSLLLKDSFIDSFPARDQPFIKLFVDTQLFTVLSDSRLSSFESGES* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1413 820 MobiDBLite consensus disorder prediction 41 55 - -
Gso19g1413 820 Pfam DENN (AEX-3) domain 585 691 IPR001194 -
Gso19g1413 820 SMART DENN_cls 291 692 IPR001194 -
Gso19g1413 820 Gene3D - 119 340 - -
Gso19g1413 820 ProSiteProfiles Tripartite DENN domain profile. 164 818 IPR037516 -
Gso19g1413 820 PANTHER BNAA09G10210D PROTEIN 25 817 - -
Gso19g1413 820 SMART uDENN_cls 127 262 IPR005113 -
Gso19g1413 820 Gene3D - 589 754 IPR043153 -
Gso19g1413 820 MobiDBLite consensus disorder prediction 40 64 - -
Gso19g1413 820 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 25 817 - -
Gso19g1413 820 Pfam uDENN domain 183 261 IPR005113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1413 Gso-Chr19 42980855 42990629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1413 - - gmx:100814487 1641.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1413 19 42980855 42990629 Gso3g1418 3 40144603 40154628 GST