Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1414 ATGGAGGGTGGGGGTAGTAGTTTTAGGATTGGAAGTTCATCCATTTGGAGGAACAGCGACGCGGCGGAGATCTTCTCAAACTCTTTCCACCAAGAGAATGATGAAGAGGCTCTTAAATGGGCTGCCATTCAGAAACTTCCTACAGTTGCGCGTTTGAGGAAAGCTTTGATCACTTCACCCGATGGCGAGTCCAATGAGATCGATGTAAAGAAACTTGGGTTGCAAGAAAAGAAAGCTTTGCTTGAAAGACTGGTGAAAACTGCTCAAGAGGACAATGAGAAGTTTTTGCTCAAGCTCAAGGACAGAATTGATAGAGTTGGAATTGATCTTCCTACCATAGAGGTTCGGTTTGAGAACCTGAGCATCGAAGCAGAAGCTCGTGCAGGAACTAGAGCTTTGCCTACATTCACTAACTTCATCGTTAATATACTGGAGGGCTTGTTGAACTCTCTTCATGTACTTCCAAACAGAAAACAACATTTAAACATTCTAGAGGATGTTAGCGGAATAATAAAGCCTGGAAGAATGACATTGCTTTTAGGCCCTCCAAGTTCTGGGAAAACCACACTCCTACTAGCCTTGGCTGGAAAACTTGATCCAAAATTAAAGTTCTCTGGAAAGGTAACTTATAATGGTCACGGGATGAATGAGTTTGTACCCCAAAGGACTGCTGCTTATGTCAATCAAAATGATCTTCACGTTGCAGAATTGACGGTCAGAGAAACCTTGGCCTTCTCAGCCAGGGTCCAAGGAGTTGGACCTCGTTACGACTTGCTGGCGGAATTGTCCAGAAGAGAAAAAGAGGCAAATATCAAGCCTGATCCAGATATTGATGCCTATATGAAGGCTGTAGCATCTGAAGGACAGAAGGCAAATATGATAACAGATTATATCCTGAGGATTTTGGGACTAGAGGTTTGTGCTGATACTGTTGTAGGAAATGCAATGTTAAGAGGTATCTCTGGTGGACAAAGGAAACGTGTTACAACAGGGGAGATGCTAGTTGGACCAGCTAAAGCTCTTTTCATGGATGAAATATCCACTGGTTTGGATAGCTCAACGACTTTTCAGATTGTGAATTCACTAAAGCAATATGTCCACATTCTCAAAGGAACCACAGTCATCTCACTCCTGCAGCCAGCACCAGAGACTTACAATCTTTTTGATGACATCATTCTACTCTCTGATAGTCACATTGTGTATCAGGGTCCTCGTGAACACGTGCTTGAATTTTTCGAATTAATGGGTTTTAAATGTCCCCAGAGGAAAGGTGTGGCAGACTTTTTGCAAGAAGTTACATCAAGGAAAGATCAGGAGCAGTACTGGGCACACAAAGATCAGCCTTATAGATTTGTCACAGCCAAAGAGTTCTCGGAGGCACATAAGTCATTTCATATTGGGAGAAGCCTTGGTGAAGAACTTGCTACTGAATTTGACAAGTCTAAGAGCCACCCAGCCGCATTGACAACCAAAATGTATGGAGTGGGAAAATGGGAGCTGTTAAAAGCTTGCTTATCGAGGGAATATTTACTTATGAAGCGCAATTCATTCGTCTACACCTTCAAACTTTGCCAACTTGCTGTATTAGCAATTATTGCCATGACCATTTTCCTCCGGACCGAGATGCACAGAGATTCAGTGACTCATGGAGGCATATATGTGGGTGCATTGTTCTATGGTGTTGTTGTGATTATGTTCAATGGATTGGCTGAACTTTCCATGGTCGTTTCACGGCTTCCTGTTTTCTACAAGCAAAGGGACTATCTCTTCTTCCCTTCATGGGTATATGCACTTCCTGCATGGATCCTAAAAATCCCCCTGACTTTTGTGGAAGTGGGTGTTTGGGTATTCCTCACCTACTATGCCATTGGTTTTGATCCATATGTTGGAAGATTGTTTAGGCAATACCTTGTTCTTGTACTAGTAAATCAAATGGCATCGGCATTGTTCCGATTAGTTGCAGCAGTTGGGAGGGAAATGACAGTGGCTCTAACACTTGGGTCGTTTACACTGGCCATCCTATTTGCTATGAGTGGTTTTGTCCTATCAAAAGAAAATATTAAAAAATGGTGGCTATGGGGCTTCTGGATCTCACCTATGATGTATGGACAAAATGCCATGGTAAATAATGAGTTCCTTGGGAAGAGATGGAGACATTTTCTACCTAACTCAACCGAGGCACTAGGAGTTGAAATTTTGAAATCCCGTGGATTCTTCACTCAGTCATACTGGTACTGGATAGGTGTTGGGGCTTTGATTGGATATACATTACTTTTCAACTTTGGCTACATCCTTGCTCTCACATACTTAAATCCACTTGGGAAACATCAAGCTGTTATATCAGAGGAACCTCAAATCAATGACCAGAGTGGTGATAGTAAAAAGGGAACTAATGTGTTGAAGAGCATACAACGTAGCTTCTCTCAGCACTCAAATAGAGTGAGAAATGGCAAAAGTTTAAGTGGAAGCACCTCTCCCGAGACAAACCATAACAGGACAAGAGGAATGATTCTTCCTTCTGAACCTCATTCCATCACCTTTGATGATGTAACATATTCTGTCGACATGCCTGTGGAAATGAGGAATAGAGGTGTTGTTGAGGATAAATTGGCTCTATTGAAGGGTGTCAGTGGAGCTTTCAGGCCAGGTGTTCTCACTGCTCTAATGGGTGTCACAGGTGCAGGCAAAACAACTCTGATGGATGTACTCGCTGGTAGAAAAACTGGGGGATATATTGGGGGGAATATCACAATCTCTGGTTATCCAAAGAAGCAAGAAACATTTGCACGGATTTCTGGATACTGCGAGCAAAATGATATCCACTCTCCTCATGTTACTGTATATGAATCTTTGCTTTACTCAGCATGGCTTCGACTGTCCCCAGAAATCAATGCTGACACCAGGAAGATGTTCATCGAGGAAGTTATGGAACTTGTGGAACTGAAAGCACTAAGGAACGCATTAGTTGGATTGCCTGGTATTAATGGTCTCTCAACAGAGCAACGCAAAAGGTTGACTATTGCAGTTGAACTTGTGGCAAATCCTTCTATAATATTTATGGATGAGCCAACTTCTGGGCTAGATGCAAGAGCTGCTGCTATTGTCATGAGAACAGTTAGGAACACAGTAGACACCGGAAGAACAGTTGTCTGTACCATCCATCAGCCAAGCATAGACATATTTGAATCTTTTGATGAGCTTTTGCTAATGAAGCAAGGAGGCCAAGAAATATATGTGGGGCCACTTGGACATCATTCTTCCCATTTAATTAATTACTTTGAGGGAATCCAAGGTGTCAATAAGATTAAAGATGGCTATAATCCGGCAACATGGATGCTGGAAGTCTCGACTTCAGCAAAAGAAATGGAATTGGGGATTGATTTTGCTGAGGTGTACAAAAATTCAGAGTTATACAGGAGAAACAAAGCACTTATTAAAGAATTGAGTACTCCAGCTCCTGGTTCAAAAGACCTTTATTTCCCATCACAGTACTCAACCTCCTTCCTCACTCAATGCATGGCTTGCTTATGGAAACAACATTGGTCTTACTGGCGCAATCCTCTATACACTGCTATAAGATTTCTTTACTCAACTGCTGTAGCTGCTGTGCTTGGTAGCATGTTCTGGGACCTTGGCTCCAAAATTGACAAACAACAAGATCTTTTCAATGCCATGGGCTCCATGTATGCTGCTGTTCTCCTTATTGGCATTAAGAATGCTAATGCAGTGCAGCCAGTGGTTGCTGTTGAGCGAACAGTCTTTTATAGGGAAAAAGCAGCCGGAATGTATTCAGCTTTACCGTATGCTTTTGCTCAGGTTCTAATTGAGCTCCCATATGTTCTAGTACAAGCTGTGGTATATGGCATTATAATTTATGCCATGATTGGTTTTGAGTGGACTGTAACTAAAGTTTTCTGGTACCTATTCTTCATGTACTTCACCTTCCTGACCTTCACCTACTATGGCATGATGTCAGTAGCAGTGACCCCAAACCAACACATTTCTTCTATAGTTTCCTCTGCATTCTATGCAGTGTGGAATCTCTTCTCAGGATTCATAGTCCCACGACCGAGAATTCCAGTGTGGTGGAGGTGGTACAGTTGGGCAAATCCTGTAGCATGGAGTTTGTATGGATTGGTGGCTTCACAATATGGAGATATAAAGCAAAGCATGGAATCCAGCGACGGGAGAACGACAGTGGAAGGCTTTGTAAGAAGCTACTTTGGTTTCAAGCATGATTTTCTGGGAGTGGTTGCAGCTGTGATTGTTGCATTCCCAGTAGTCTTTGCATTGGTCTTTGCCATATCAGTGAAGATGTTCAATTTCCAACGGCGTTAA 4338 0.4246 MEGGGSSFRIGSSSIWRNSDAAEIFSNSFHQENDEEALKWAAIQKLPTVARLRKALITSPDGESNEIDVKKLGLQEKKALLERLVKTAQEDNEKFLLKLKDRIDRVGIDLPTIEVRFENLSIEAEARAGTRALPTFTNFIVNILEGLLNSLHVLPNRKQHLNILEDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGKLDPKLKFSGKVTYNGHGMNEFVPQRTAAYVNQNDLHVAELTVRETLAFSARVQGVGPRYDLLAELSRREKEANIKPDPDIDAYMKAVASEGQKANMITDYILRILGLEVCADTVVGNAMLRGISGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVNSLKQYVHILKGTTVISLLQPAPETYNLFDDIILLSDSHIVYQGPREHVLEFFELMGFKCPQRKGVADFLQEVTSRKDQEQYWAHKDQPYRFVTAKEFSEAHKSFHIGRSLGEELATEFDKSKSHPAALTTKMYGVGKWELLKACLSREYLLMKRNSFVYTFKLCQLAVLAIIAMTIFLRTEMHRDSVTHGGIYVGALFYGVVVIMFNGLAELSMVVSRLPVFYKQRDYLFFPSWVYALPAWILKIPLTFVEVGVWVFLTYYAIGFDPYVGRLFRQYLVLVLVNQMASALFRLVAAVGREMTVALTLGSFTLAILFAMSGFVLSKENIKKWWLWGFWISPMMYGQNAMVNNEFLGKRWRHFLPNSTEALGVEILKSRGFFTQSYWYWIGVGALIGYTLLFNFGYILALTYLNPLGKHQAVISEEPQINDQSGDSKKGTNVLKSIQRSFSQHSNRVRNGKSLSGSTSPETNHNRTRGMILPSEPHSITFDDVTYSVDMPVEMRNRGVVEDKLALLKGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYIGGNITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSPEINADTRKMFIEEVMELVELKALRNALVGLPGINGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLINYFEGIQGVNKIKDGYNPATWMLEVSTSAKEMELGIDFAEVYKNSELYRRNKALIKELSTPAPGSKDLYFPSQYSTSFLTQCMACLWKQHWSYWRNPLYTAIRFLYSTAVAAVLGSMFWDLGSKIDKQQDLFNAMGSMYAAVLLIGIKNANAVQPVVAVERTVFYREKAAGMYSALPYAFAQVLIELPYVLVQAVVYGIIIYAMIGFEWTVTKVFWYLFFMYFTFLTFTYYGMMSVAVTPNQHISSIVSSAFYAVWNLFSGFIVPRPRIPVWWRWYSWANPVAWSLYGLVASQYGDIKQSMESSDGRTTVEGFVRSYFGFKHDFLGVVAAVIVAFPVVFALVFAISVKMFNFQRR* 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1414 1445 PANTHER ATP-BINDING CASSETTE TRANSPORTER 7 1445 - -
Gso3g1414 1445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 858 1081 IPR027417 -
Gso3g1414 1445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 421 IPR027417 -
Gso3g1414 1445 Gene3D - 845 1088 IPR027417 -
Gso3g1414 1445 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 148 421 IPR003439 GO:0005524
Gso3g1414 1445 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 7 1445 - -
Gso3g1414 1445 Pfam ABC transporter 164 346 IPR003439 GO:0005524
Gso3g1414 1445 Pfam ABC transporter 873 1025 IPR003439 GO:0005524
Gso3g1414 1445 MobiDBLite consensus disorder prediction 807 838 - -
Gso3g1414 1445 MobiDBLite consensus disorder prediction 807 835 - -
Gso3g1414 1445 Pfam ABC-2 type transporter 379 466 IPR043926 GO:0140359
Gso3g1414 1445 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 845 1097 IPR003439 GO:0005524
Gso3g1414 1445 SMART AAA_5 173 398 IPR003593 -
Gso3g1414 1445 SMART AAA_5 882 1074 IPR003593 -
Gso3g1414 1445 Pfam Plant PDR ABC transporter associated 717 780 IPR013581 -
Gso3g1414 1445 CDD ABCG_PDR_domain2 842 1080 IPR034003 -
Gso3g1414 1445 CDD ABCG_PDR_domain1 163 403 IPR034001 -
Gso3g1414 1445 Gene3D - 150 464 IPR027417 -
Gso3g1414 1445 Pfam ABC-2 type transporter 1170 1384 IPR013525 GO:0016020|GO:0140359
Gso3g1414 1445 Pfam ABC-2 type transporter 500 712 IPR013525 GO:0016020|GO:0140359
Gso3g1414 1445 Coils Coil 71 94 - -
Gso3g1414 1445 Pfam ABC-transporter N-terminal 77 139 IPR029481 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1414 Gso-Chr3 40084269 40092052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1414 K08711 - gmx:732607 2821.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1407 19 42925557 42933515 Gso3g1414 3 40084269 40092052 GST