Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1411 ATGAGACGGCGCCCCGTGGCGGGCGTTCTCCCCGACCAAATGGAGAAATCAAACACCAAAAACCCTCATTCCAGACTCTGCTTTCTCGCCTCCCTCTCCGCATTCTTCTGGTTCCTCCTCCTCTACTTCCACTTCGCCGTCCTCCGCCACCAACCCACCGCCCCTGACCCAGCAGTCCCCATCACTTTCCAATCCCAACAACAACACCAACAACCTCGTAAAAACCTCGGCTTCCCTGAGCGAGTTTCCGAACCGAAGGAACCCACTTTCCCCTTCGACCGTGCCCTCCGAACCGCCGACAACAAGAGCGACTCATGCGGAGGACGCTACATCTTCGTCCACGACCTTCCCTCGCGCTTCAACGAGGACATGTTGAAGCATTGCAGAAGCTTATCCCTTTGGACCAACATGTGCAAGTTCACTACCAACGCCGGCCTCGGTCCTCCGTTGGAAAACGTCAACGGCGTCTTCTCCGACACCGGCTGGTACGCCACCAACCAGTTTGCCGTTGACGTCATCTTCAGCAACAGAATGAAACAATACCAATGCCTCACTCGCGATCCCTCCGTCGCCGCCGCGTTCTTCGTTCCCTTCTACGCCGGTTTCGACATCGCTCGCTACCTTTGGGGATACAACATCTCAATGCGCGACGCTGCATCGCTTGACCTCGTGAATTGGCTCATGAATAGACCGGAGTGGAAGATCATGAACGGGAGAGACCATTTTCTCGTTGCCGGTAGGATCACTTGGGATTTTCGGAGACTCACTGAAGAAGAATCGGATTGGGGGAACAAGCTTTTGTTTTTACCTGCTGCGAAGAACATGTCGATGCTTGTGGTGGAGTCGAGTCCGTGGAACGCGAACGATTTCGGGATTCCGTATCCGACTTATTTTCATCCTGCCAAGGATGATGATGTGTTTATCTGGCAGGAGAGGATGAGGAGGTTGGAGAGGAAGTGGCTGTTTTCGTTTGCTGGAGCTCCGCGACCGGATAACCTGAAATCGATAAGGGGCCAGATTATTGAGCAGTGTAGGAGATCCAAGGTTGGGAAGTTGTTGGAGTGTGATTTTGGGGAGAGTAAGTGTCATTCCCCTAGTAGTATAATGCAGATGTTTCAAGGGTCGCTTTTCTGCCTTCAGCCTCAAGGGGATTCGTATACTAGACGATCTGCTTTTGATTCAATGCTGGCTGGGTGTATACCTGTGTTCTTCCATCCGGGTTCCGCGTACACTCAGTATACTTGGCATCTTCCGAAGAATTATACCAAGTACTCGGTATTCATTCAGGAGGATGATATTAGGAAGAGGAATGTTAGTATAGAAGAGAGGCTTAGGCAGATTCCTGAGGAGGAAGTTAGGATCATGAGGGAGGAGGTCATTAGTTTGATCCCTAGGTTGGTGTACGCGGATCCTCGATCGAAATTGGAAACTCTTAAGGATGCTTTTGATGTTTCGGTGCAGGCTGTGATTGACAAGGTTACCAACTTGAGGAAGGACATTATCGAAGGTCACACAGACGAGAACTTCATTGAGGAGAACAGTTGGAAGTATGCATTGTTGGATGAGGGACAACGTGAGGTTGGGCCTCACGAATGGGATCCTTTCTTCTCCAAACCAAAGCCGGGTGGGGATTCCGATGATTTGTCGGCTGAGGCTGCGAAGAATTCTTGGAAAAATGAGCAAAGAAATCAGTCGTGA 1698 0.5088 MRRRPVAGVLPDQMEKSNTKNPHSRLCFLASLSAFFWFLLLYFHFAVLRHQPTAPDPAVPITFQSQQQHQQPRKNLGFPERVSEPKEPTFPFDRALRTADNKSDSCGGRYIFVHDLPSRFNEDMLKHCRSLSLWTNMCKFTTNAGLGPPLENVNGVFSDTGWYATNQFAVDVIFSNRMKQYQCLTRDPSVAAAFFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLMNRPEWKIMNGRDHFLVAGRITWDFRRLTEEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDDDVFIWQERMRRLERKWLFSFAGAPRPDNLKSIRGQIIEQCRRSKVGKLLECDFGESKCHSPSSIMQMFQGSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIQEDDIRKRNVSIEERLRQIPEEEVRIMREEVISLIPRLVYADPRSKLETLKDAFDVSVQAVIDKVTNLRKDIIEGHTDENFIEENSWKYALLDEGQREVGPHEWDPFFSKPKPGGDSDDLSAEAAKNSWKNEQRNQS* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1411 565 Pfam Exostosin family 106 443 IPR040911 -
Gso3g1411 565 PANTHER BNAA09G10260D PROTEIN 16 520 - -
Gso3g1411 565 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 16 520 IPR004263 GO:0006486|GO:0016757
Gso3g1411 565 MobiDBLite consensus disorder prediction 528 565 - -
Gso3g1411 565 MobiDBLite consensus disorder prediction 63 91 - -
Gso3g1411 565 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1411 Gso-Chr3 40051536 40054007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1411 K20888 - gmx:100790024 1158.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1405 19 42867495 42870652 Gso3g1411 3 40051536 40054007 GST
Gso3g1411 3 40051536 40054007 Gso10g0349 10 3680914 3683631 PCT
Gso10g0349 10 3680914 3683631 Gso3g1411 3 40051536 40054007 PCT