Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1405 ATGAGACGGCGCCCCGTGGCGGGTGTTCTCCCCGACCAAATGGAGAAAGCAAACACCAAAAACCCTAATTCCAGACTTTGCTTTCTCGCTTCCCTCTCCGTATTCTTCTGGTTCCTCCTCCTCTACTTCCACTTCGCCGTCCTCCGCCACCAACCCACCAACCCTAACCCCGTAGTCCCCATCACTCTCCAACCTCAACAACCTCGTAAAAACCTCGGCTTCCCCGAGAAAATTTCCCAACCGGAGAAACCCACTTTCCCCTTCGACCGTGCCCTCCGAACCGCCGACAACAAGAGCGACCCATGCGGGGGGCGCTACATCTACGTCCACGACCTCCCCTCGCGCTTCAACGAGGACATGTTAAAGCATTGCAGAAGCTTATCTCTTTGGACCAACATGTGCAAGTTCACCACCAATGCCGGCCTCGGTCCGCCGTTGGAGAACGTTAACGGTGTGTTCTCCGACACCGGCTGGTATGCCACCAACCAGTTCACCGTCGACGTCATCTTCAGCAACAGGATGAAGCAGTACCAATGCCTCACTCGAGATCCTTCCGTCGCCGCCGCATTCTTCGTCCCCTTCTACGCCGGCTTTGACATCGCCCGCTATCTATGGGGTTACAACATCTCAATGCGCGATGCTGCATCGCTTGACCTCGTGAATTGGCTCATGAATAGACCGGAGTGGAAGATCATGAATGGGAGAGACCATTTTCTTGTCGCCGGTAGGATCACATGGGATTTTCGAAGACTCACTGAAGAAGAATCGGATTGGGGGAACAAGCTTTTGTTTTTGCCCGCTGCGAAGAACATGTCGATGCTTGTGGTGGAGTCAAGTCCTTGGAATGCCAATGATTTCGGGATTCCGTATCCGACTTATTTTCATCCTGCCAAGGATGATGATGTGTTCACCTGGCAGGAGAGGATGAGGAGGCTGGAGAGGAAGTGGTTGTTTTCGTTTGCCGGAGCTCCGCGGCCGGATAACCCGAAATCGATAAGGGGCCAGATTATTGAGCAGTGTAGGAGATCCAAAGTTGGGAAGCTGTTGGAGTGTGATTTTGGGGAGAGTAAGTGTCATTCCCCTAGTAGTATAATGCAGATGTTTCAAGGGTCGCTTTTCTGTCTTCAGCCTCAAGGGGATTCGTATACCAGAAGATCTGCTTTTGATTCAATGCTGGCTGGGTGTATACCAGTGTTCTTCCATCCGGGTTCGGCGTACACCCAGTATACATGGCATCTTCCTAAGAATTATACCAAGTACTCGGTGTTCATTCCGGAGGATGATCTTAGGAAGAGGAATGTTAGTATAGAAGAGAGGCTTAGTCAGATTCCTGAGGAGGAAGTTAGGATCATGAGGGAGGAGGTCATTGGTTTGATCCCTAGATTGGTGTACGCAGATCCTCGATCCAAACTTGAGACTCTTGAGGATGCATTTGATGTTTCGGTGCAGGCTGTGATTGACAAGGTTACCAACTTGAGGAAGGACATTATGGAAGGTCGCACGGACGAGAACTTCATTGAGGAGAACAGTTGGAAGTACGCGTTGTTGGATGAGGGACAGCGCGAGGTTGGACCTCATGAATGGGATCCTTTCTTCTCCAAACCAAAGCCGGGTGGGGATTCCGATGATTTGTCAGCTGAGGCTGCGAAGAATTCTTGGAAAAATGAACAAAGAAATCAGTCGTGA 1686 0.5089 MRRRPVAGVLPDQMEKANTKNPNSRLCFLASLSVFFWFLLLYFHFAVLRHQPTNPNPVVPITLQPQQPRKNLGFPEKISQPEKPTFPFDRALRTADNKSDPCGGRYIYVHDLPSRFNEDMLKHCRSLSLWTNMCKFTTNAGLGPPLENVNGVFSDTGWYATNQFTVDVIFSNRMKQYQCLTRDPSVAAAFFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLMNRPEWKIMNGRDHFLVAGRITWDFRRLTEEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDDDVFTWQERMRRLERKWLFSFAGAPRPDNPKSIRGQIIEQCRRSKVGKLLECDFGESKCHSPSSIMQMFQGSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIPEDDLRKRNVSIEERLSQIPEEEVRIMREEVIGLIPRLVYADPRSKLETLEDAFDVSVQAVIDKVTNLRKDIMEGRTDENFIEENSWKYALLDEGQREVGPHEWDPFFSKPKPGGDSDDLSAEAAKNSWKNEQRNQS* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1405 561 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 16 66 IPR004263 GO:0006486|GO:0016757
Gso19g1405 561 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 92 516 IPR004263 GO:0006486|GO:0016757
Gso19g1405 561 Pfam Exostosin family 102 439 IPR040911 -
Gso19g1405 561 PANTHER BNAA09G10260D PROTEIN 92 516 - -
Gso19g1405 561 PANTHER BNAA09G10260D PROTEIN 16 66 - -
Gso19g1405 561 MobiDBLite consensus disorder prediction 524 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1405 Gso-Chr19 42867495 42870652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1405 K20888 - gmx:100811811 1171.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1405 19 42867495 42870652 Gso3g1411 3 40051536 40054007 GST
Gso19g1405 19 42867495 42870652 Gso10g0349 10 3680914 3683631 PCT
Gso10g0349 10 3680914 3683631 Gso19g1405 19 42867495 42870652 PCT