Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1407 ATGATGCTAAGAAGCTCTTCAACACCAGTTCTTGGATCCCTCCTCTCTTCCTTCACAGATAGCCCTAACAACAATATTCACTCAGAAACCTGTCATGCACTGAAACACTTTCCACCAACCACTGTCCCACAACATTATCACAAACTTACTTTCCACCAAACTGGGTCCTCTGCATGTGGTTCTTCTCCAATCTCTCCCTCAATTGGTGAGCTTGAAAGGCAAAACAAAGGCTTGATCAGAAGAGTCCAATCTGATGGGAACTTGCAAGACTTGGCCTTCTTTTCTTGCAGCAATGAAGAAAGGTTTGAGTTTTCAGACCCTTCCAAGAGGTTTTCAGCTAGACACAGGAGCTTGGTGCTGGAGACCATTCCTTCTTTCTCTACTGCCAAGCACAATGGCTTGAGTGAAGAAGAGGAAGATGAAGAAATGGAAAGTGAGAGTGAAGATGGGTTCAGTGTGCTGAATGGTGGGAAGGGTGTAATATTCAGTGAAGAAGTGAGGGTGAAGGATGGAGTTTGTAGGGTGAGTTTTGGTGACCAGGAAGAGGTTAGTAGTGGTAAAGAAATGTATCTTGCAAAGGGACTTGGTGTAGAGTGCTGTGGTGATGGCATAGGTGGTTGTAGAGGTGGTGGTGGAGGTGGTGGTGATCATAATCCCTTGGGTTCTGGAGGAAATGATGGAGAAAGGCATGGAGTGGAAGAATATTACAAGAAAATGGTTAGGGAAAATCCTGGGGATCCTTTGTTTCTGAGGAATTATGCCAATTTTTTGTATCAGTGCAAACAAGACCGTGAAGGAGCAGAGGAGTATTATTCCCGTGCCATACTTGCAGACCCAAATGATGGAGAGGTTCTATCACAGTATGGGAAGTTAGTTTGGGAACTACATCACAACCAAGAACGTGCCTCCAGCTATTTTGAAAGAGCAGTCCAAGCCTCTCCTGAAGACAGCCATGTACAAGCAGCATATGCTAGTTTCCTTTGGGACACAGAGGAAGACGAGGATGGTATCAATGAACCACAAAGTTTACCGCCACATTCTCATCAAGGAGCTGTGGCTACTGCAGGTGCTTGA 1074 0.4525 MMLRSSSTPVLGSLLSSFTDSPNNNIHSETCHALKHFPPTTVPQHYHKLTFHQTGSSACGSSPISPSIGELERQNKGLIRRVQSDGNLQDLAFFSCSNEERFEFSDPSKRFSARHRSLVLETIPSFSTAKHNGLSEEEEDEEMESESEDGFSVLNGGKGVIFSEEVRVKDGVCRVSFGDQEEVSSGKEMYLAKGLGVECCGDGIGGCRGGGGGGGDHNPLGSGGNDGERHGVEEYYKKMVRENPGDPLFLRNYANFLYQCKQDREGAEEYYSRAILADPNDGEVLSQYGKLVWELHHNQERASSYFERAVQASPEDSHVQAAYASFLWDTEEDEDGINEPQSLPPHSHQGAVATAGA* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1407 357 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 341 - -
Gso3g1407 357 PANTHER OSJNBA0004N05.2 PROTEIN 1 341 - -
Gso3g1407 357 SUPERFAMILY TPR-like 233 337 IPR011990 GO:0005515
Gso3g1407 357 SMART hat_new_1 297 329 IPR003107 GO:0006396
Gso3g1407 357 SMART hat_new_1 227 259 IPR003107 GO:0006396
Gso3g1407 357 SMART hat_new_1 262 294 IPR003107 GO:0006396
Gso3g1407 357 MobiDBLite consensus disorder prediction 333 357 - -
Gso3g1407 357 Gene3D Tetratricopeptide repeat domain 225 338 IPR011990 GO:0005515
Gso3g1407 357 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1407 Gso-Chr3 40017693 40020273 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1407 - - gmx:100788436 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1400 19 42828841 42831622 Gso3g1407 3 40017693 40020273 GST