Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1392 ATGGCGAAAAAACCGTTACTCTGCTGGCTCCTCCTCCTCGCCGTGCTCGCCGAAGCCGGAGCTTCCGACGAAGACGGCGCCGAGCTCGACTACTCGAAGCTCTCCGGCATTATAATCCCTGGCTTCGCATCCACTCAGCTCCGAGCATGGTCCATTCTCGACTGTCCTTACTCTCCGCTCGATTTCAACCCTCTCGATTTGGTCTGGCTCGACACAACCAAACTTCTTTCTGCTGTCAATTGCTGGCTTAAGTGTATGGTGTTGGATCCTTACAATCAGACAGATCATCCTGATTGCAAGTCCCGTCCTGATAGTGGTCTTTCTGGTATTACAGAACTTGATCCGGGTTATATAACAGGACCTCTTTCATCGGTTTGGAAAGAATGGATTAAGTGGTGTATTGAATTTGGCATAGAAGCTAATGCAATAATTGCTGTTCCATATGATTGGAGATTGTCGCCCTCCAAGCTTGAAGAGCGGGACCTTTACTTTCATAAGCTAAAAATAACATTTGAAACTGCTTACAAACTTCGTGGTGGCCCCTCTTTAGTTTTTGCCCATTCATTGGGTAATCATGTTTTCCGTTATTTCTTGGAGTGGTTGAAGCTAGAGATTGCACCAAAACATTATATCCAGTGGTTGGATCAACATATTCGTGCCTATTTTGCTGTTGGAGCTCCCCTTCTTGGTGCAATGGAAACCATTGAAGCAACACTTTCTGGATTCACATTTGGTCTTCCTATATCCGAGGGAACAGCTCGGATGATGTTCAACTCCTTTGGTTCATCATTATGGATGATGCCTTTTTCCAAGTACTGTAGAACAGATAATAAATATTGGAAGCATTTTTCTGGGGGAAGTCACGTGGGCCCACAAACATATCACTGTGATGAGCAGGAGTTTAAGACAAACTTATCTGGGTGGCCAACAAAAATAATCAACATTGAAATTCCCTCAACTCGTGAAATACCCGAGGCCAACTTGTCCAGCATGGAGTGTGGACTACCTACTCAATTATCTTTCTCAGCTCGGGAAATATCAGATGGCACCTTTTTCAAAGCAATTGAAGATTATGACCCAGACAGCAAGAGGCTCTTGTACCTGTTAGAGAAATCATATCTTGGCGATCCTGTTCTTAATCCCCTTACACCTTGGGATCGGCCGCCAATAAAAAATGTATTCTGCATCTATGGGACTGATTCAAAAACAAAGGTTGGTTACTACTATGCTCCTAGCGGCAAGCCTTACCCTGATAATTGGATCATTACAGATGTCGTTTATGAGTTTGAAGGATCTCTAATCTCAAGGTCAGGGAATCAGGTTGAAGGGAACCCTGGAGCAATAAGTGGCGATGAGACGGTGCCATATCTCTCCCTTTCCTGGTGCAAAAACTGGCTTGGACCAAAAGTGAACATAACAAAAGCTCCACAGTCAGAGCATGATGGTTCAGATGTACAGATTAAATTGAATGTGAAACATCCCCATGAAGAAGATATTGTTCCAAACATGACAAGATCACCAAGGGTGAAGTACATAACATATTATGAAGATTCTGAAAGTCTTCCTGGAAAGAGGACAGCAGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATCGTTAGATCACCAGTGCTAATGAGGGAATTATGGCTTGAGATGTGGCATGATATCCATCCTGATGCAAATTCGAAGTTTGTAAAAAAAGCTAAGCGTGGTCCTTTAAGAGATGAGGACTGTTATTGGGATTATGGGAAAGCTCGCTGTGCATGGCCTGAGTACTGTGAATATAGGTATGTTTTTGGTGATGTTCACTTGGGACAAAGCTGCAGGTTGAGATATACAACAGCTGAATTGTTGTCACATTATTTGTAA 1872 0.4332 MAKKPLLCWLLLLAVLAEAGASDEDGAELDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMVLDPYNQTDHPDCKSRPDSGLSGITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIIAVPYDWRLSPSKLEERDLYFHKLKITFETAYKLRGGPSLVFAHSLGNHVFRYFLEWLKLEIAPKHYIQWLDQHIRAYFAVGAPLLGAMETIEATLSGFTFGLPISEGTARMMFNSFGSSLWMMPFSKYCRTDNKYWKHFSGGSHVGPQTYHCDEQEFKTNLSGWPTKIINIEIPSTREIPEANLSSMECGLPTQLSFSAREISDGTFFKAIEDYDPDSKRLLYLLEKSYLGDPVLNPLTPWDRPPIKNVFCIYGTDSKTKVGYYYAPSGKPYPDNWIITDVVYEFEGSLISRSGNQVEGNPGAISGDETVPYLSLSWCKNWLGPKVNITKAPQSEHDGSDVQIKLNVKHPHEEDIVPNMTRSPRVKYITYYEDSESLPGKRTAVWELDKANHRNIVRSPVLMRELWLEMWHDIHPDANSKFVKKAKRGPLRDEDCYWDYGKARCAWPEYCEYRYVFGDVHLGQSCRLRYTTAELLSHYL* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1392 623 Gene3D alpha/beta hydrolase 93 258 IPR029058 -
Gso3g1392 623 SUPERFAMILY alpha/beta-Hydrolases 163 467 IPR029058 -
Gso3g1392 623 Pfam Lecithin:cholesterol acyltransferase 66 493 IPR003386 GO:0006629|GO:0008374
Gso3g1392 623 PANTHER BNAA09G50730D PROTEIN 11 606 - -
Gso3g1392 623 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 11 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1392 Gso-Chr3 39879091 39890547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1392 10 623 Acyl Lipid Metabolism Gene Families AT1G04010 77.472 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1392 - - gmx:100783649 1291.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1387 19 42700911 42713396 Gso3g1392 3 39879091 39890547 GST