Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1387 ATGGTCAGAGTCACGTTTTTTTCATTCTTCCCTCCATCCCTCTCCCTCACAATGGCGAAAAACCCGTTACTCTGCTCGATCGTCCTCCTCGCCGTGCTCGCCGGAGCCACCTCAGACGACGGCGCCGAGCTCGACTACTCGAAGCTCTCCGGCATTATAATCCCCGGCTTCGCGTCCACTCAGCTCCGAGCATGGTCCATTCTCGACTGTCCTTACTCTCCGCTCGATTTCAACCCTCTCGACTTGGTCTGGCTCGACACAACCAAACTTCTTTCTGCTGTCAATTGCTGGCTTAAGTGCATGGTGTTGGATCCTTACAACCAGACAGATCATCCTGATTGCAAGTCCCGTCCGGATAGTGGTCTTTCTGGCATTACAGAACTTGATCCAGGTTATATAACAGGACCTCTTTCATCAGTTTGGAAAGAATGGATTAAGTGGTGTATTGAATTTGGCATAGAAGCTAATGCAATAATTGCTGTTCCGTATGATTGGAGATTGTCGCCCTCCAAGCTTGAAGAGCGGGACCTTTACTTTCATAAGCTAAAAATAACATTTGAAACTGCTTACAAACTTCGTGGTGGCCCCTCTTTAGTTTTTGCCCATTCATTGGGTAATCATGTTTTCCGTTATTTCTTGGAGTGGTTGAAGCTAGAGATTGCACCAAAACATTATATCCAGTGGCTGGATCAACATATTCATGCCTATTTTGCTGTTGGAGCTCCCCTTCTTGGTGCAATGGAAACCATTGAAGCAACACTTACTGGATTCACATTTGGTCTTCCTATATCTGAGGGAACAGCTCGGATGATGTTCAACTCCTTTGGTTCATCATTATGGATGATGCCTTTTTCCAAGTACTGTAGAACAGATAATAAATATTGGAAGCATTTTTCTGGGGGAAGGCAAGTGGGTCCACCAACATATCACTGTGATGAGCAGGAGTTTAAGACAAACTTATCTGGGTGGCCAACAAAAATAATCAACATTGAAATTCCCTCAACTCGTGAAATACCTGAGGCCAACTTGTCCAGCATGGAGTGCGGACTACCTACTCAATTATCTTTCTCAGCTCGGGAAATATCAGATGGCACCTTTTTCAAGGCAATTGAAGATTATGACCCAGACAGCAAGAGGCTCTTGTACCTGTTAGAGAAATCATATCTTGGCGATCCTGTTCTTAATCCCCTTACACCTTGGGACCGGCCACCAATAAAAAATGTATTCTGCATTTATGGGACTGATTCAAAGACAAAGGTTGGTTACTACTATGCTCCTAGCGGCAAGCCTTACCCTGATAACTGGATCATTACGGATGTCGTTTATGAGTTTGAAGGATCTCTAATCTCAAGGTCAGGGAATCTGGTTGAAGGGAACCCTGGAGCAATAAGTGGCGATGAGACGGTGCCATATCTCTCCCTTTCCTGGTGCAAAAACTGGCTTGGACCGAAAGTGAACATAACAAAAGCTCCACAGTCAGAGCATGATGGCTCAGATGTACAAATTAAATTGAATGTGGAACATCACCATGAAGAAGATATCGTTCCAAACATGACAAGATCACCAAGGGTGAAGTATATAACATATTATGAAGATTCTGAAAGTCTTCCTGGAAAGAGGACAGCAGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATCGTTAGATCACCAGTGCTAATGAGGGAATTATGGCTTGAGATGTGGCATGATATCCATCCTGATGCAAAATCAAAGTTTGTAAAAAAAGCTAAGCGTGGTCCTTTAAGAGATGAGGACTGTTATTGGGATTATGGGAAAGCTCGTTGTGCATGGCCTGAGTACTGTGAATATAGGTATGTTTTTGGTGATGTTCACTTGGGACAAAGCTGCAGGTTGAGATATACTACAGCTGAATTGTTGTCGCATTATTTGTAA 1917 0.4382 MVRVTFFSFFPPSLSLTMAKNPLLCSIVLLAVLAGATSDDGAELDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMVLDPYNQTDHPDCKSRPDSGLSGITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIIAVPYDWRLSPSKLEERDLYFHKLKITFETAYKLRGGPSLVFAHSLGNHVFRYFLEWLKLEIAPKHYIQWLDQHIHAYFAVGAPLLGAMETIEATLTGFTFGLPISEGTARMMFNSFGSSLWMMPFSKYCRTDNKYWKHFSGGRQVGPPTYHCDEQEFKTNLSGWPTKIINIEIPSTREIPEANLSSMECGLPTQLSFSAREISDGTFFKAIEDYDPDSKRLLYLLEKSYLGDPVLNPLTPWDRPPIKNVFCIYGTDSKTKVGYYYAPSGKPYPDNWIITDVVYEFEGSLISRSGNLVEGNPGAISGDETVPYLSLSWCKNWLGPKVNITKAPQSEHDGSDVQIKLNVEHHHEEDIVPNMTRSPRVKYITYYEDSESLPGKRTAVWELDKANHRNIVRSPVLMRELWLEMWHDIHPDAKSKFVKKAKRGPLRDEDCYWDYGKARCAWPEYCEYRYVFGDVHLGQSCRLRYTTAELLSHYL* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1387 638 Pfam Lecithin:cholesterol acyltransferase 81 508 IPR003386 GO:0006629|GO:0008374
Gso19g1387 638 Gene3D alpha/beta hydrolase 108 270 IPR029058 -
Gso19g1387 638 PANTHER BNAA09G50730D PROTEIN 24 621 - -
Gso19g1387 638 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 24 621 - -
Gso19g1387 638 SUPERFAMILY alpha/beta-Hydrolases 178 484 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1387 Gso-Chr19 42700911 42713396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1387 28 638 Acyl Lipid Metabolism Gene Families AT1G04010 77.958 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1387 - - gmx:100806466 1337.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1387 19 42700911 42713396 Gso3g1392 3 39879091 39890547 GST