Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1382 ATGGCCCGAAACCTAGGAGGATTGCTGGCGCTACTTTTCGCTGTTTCGATCTGCGGAGCCGTCACGATTCCCGGCCCCGTCTCCGATGCTCACCGTTCCGCCGCGTTAGAGCTCTTCGATGGATCGTTTTCAAGTTTAGAAGAGGCCTATGAGGCACTAAGAGTTTTTGAGATTCTTACGATTGGGAATAAGCCTGATGTGAGCACAACGACTTGCAAGAAAGTAGTGGAAAACCTTGGGTCGTCATCGCCTGTGAAGGATTTGTTCTATGCGTTAAAGGTTAATGACATATTAAAATGCAAGGTTAATGGGGATGTTTTCAAGGATATTGCTTTGAGACTTAAAGCCACTGTCAATGATGCGAGTACTTTGGTTGAGATGTACTATTCAATAGGAAGTTTGGTTCTTATAAAGGACCAGGCTTCTGATGTTGATGTGCTTCTTACTGATGCCGATGGATCCTTCCATTCAATCAAGGCTCTGAGCCAAAGTGATGGAAGGTGGCGTTATAGTTCTAATAATCCAGAGTCTAGTACCTATGCTGCTGGATTAGCACTTGAAGCACTTGCTGGAGTGATCTCATTAGCATCTTCTGAAATTGATCAGTCTAGGGTGAATACAGTGAAAAATGATATATTGAAGCTTTTCGACAGCATTGAGAAATATGATGATGGAACATTCTATTTTGATGAGAAATTTGTTGGTGGACGTGAGCATCAGGGTTCTCTTTCCACAACTTCTTCTGTTGTTCGAGGGGTTACAGCATTTGCTGCTGTAACTTCTGGAAAAATAAATCTTCCAGGGGATAAAATATTGGGTTTAGCAAATTTTTTCCTGGGAATTGGAATCCCAGGAGATGCCAAGGACTTCTTCAATCAAGTTGAATCATTAGCTCTTCTAGAGAACAACAAGGTTTCGATCCCATTGGTACTGTCACTTCCTGCAACGGTTTATTCATTATCCAAAAAAGATCAGCTCAAGGTTAGGGTGAACACTGTACTTGGTTCAGCTGCACCACCTTTAACAGTTAAGCTTGTGCAAGCTTTCCGCTCTAACGCTAAAGATTCAGCTATTGAGAGCAAGGAGCTCCAATATGATCAAAATAATGGAATTCATTTCTTGGAAGCTTTCCCAGACAATGTAGATGTGGGAACTTATGTGTTTGTTTTTGAGATTGCACTTCACGATTCTGCTGGTGAAAAAGTTTATGCTACTGGAGGCCAAATTCATGTACCAATATATGTCACTGGCATTATTAAAGTCAGCAATGCTGAAATTGCTGTTCTTGACAGTGATCTTGGAAGTGTTGAAACCCAGAAAACGCTAGATTTGGCTGGAAATGATGATGTTTCACTCTCAGCTAACCACTTGCAAAAGTTGCGCTTTTCTTTCCAGTTGACAACACCTCACGGTCATGCTTTTAAGCCTCATCAGGCATTTTTCAAGTTGAAGCATGAGACAAAGCATGAACACATCTTTGTGGTTGGAAATACTGGCAGGAAGTTTGAGATTATTCTTGATTTTCTTGGTTTGGTGGAGAAATTTTATTACCTCTCTGGCAGATATGACATTGAGCTGACTGTTGGGGATACTGTCATGGAGAACTCTTTCTTACGGCTGCTTGGTGAAGTTGATTTAGATCTTCCCGAAGCACCTGAGAAGGCAGCCCGTCTTCCTCCACTCCCTGTCGATCCTTACTCAAGATATGGGCCCAAAGCCGAGATAGCCCACTTATTCAGGGCTCCAGAAAAGCGACCACCCCAGGAACTCTCTCTTACTTTCTTGGGTTTGATCCTTCTGCCATTTATTGGCTTTTTAGTTGGGCTGTTACGCCTGGGAGTGAACTTGAAGAATTTTCCTTCTTCAGCTGTACCTGCTACATATGCCTTCTTATTCCATCTTGGCATTGCTGCAGTTCTATTGCTTTATGTACTTTTCTGGTTGAAGCTGGACTTGTTCACTACACTCAAAACTGTAGGATTTTTGGGAGCTTTTCTGTTGTTTGTGGGACACAGAATTCTTTCCCATCTCGCTTCAACATCATCTAAGTTGAAGTCTGCATGA 2064 0.4234 MARNLGGLLALLFAVSICGAVTIPGPVSDAHRSAALELFDGSFSSLEEAYEALRVFEILTIGNKPDVSTTTCKKVVENLGSSSPVKDLFYALKVNDILKCKVNGDVFKDIALRLKATVNDASTLVEMYYSIGSLVLIKDQASDVDVLLTDADGSFHSIKALSQSDGRWRYSSNNPESSTYAAGLALEALAGVISLASSEIDQSRVNTVKNDILKLFDSIEKYDDGTFYFDEKFVGGREHQGSLSTTSSVVRGVTAFAAVTSGKINLPGDKILGLANFFLGIGIPGDAKDFFNQVESLALLENNKVSIPLVLSLPATVYSLSKKDQLKVRVNTVLGSAAPPLTVKLVQAFRSNAKDSAIESKELQYDQNNGIHFLEAFPDNVDVGTYVFVFEIALHDSAGEKVYATGGQIHVPIYVTGIIKVSNAEIAVLDSDLGSVETQKTLDLAGNDDVSLSANHLQKLRFSFQLTTPHGHAFKPHQAFFKLKHETKHEHIFVVGNTGRKFEIILDFLGLVEKFYYLSGRYDIELTVGDTVMENSFLRLLGEVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHLFRAPEKRPPQELSLTFLGLILLPFIGFLVGLLRLGVNLKNFPSSAVPATYAFLFHLGIAAVLLLYVLFWLKLDLFTTLKTVGFLGAFLLFVGHRILSHLASTSSKLKSA* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1382 687 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 1 687 - -
Gso3g1382 687 Pfam Oligosaccharyltransferase subunit Ribophorin II 8 679 IPR008814 GO:0006487|GO:0008250|GO:0016021
Gso3g1382 687 PANTHER RIBOPHORIN II 1 687 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1382 Gso-Chr3 39795019 39803028 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1382 K12667 - gmx:100780415 1308.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1377 19 42605562 42615253 Gso3g1382 3 39795019 39803028 GST
Gso3g1382 3 39795019 39803028 Gso10g0324 10 3482287 3489703 PCT
Gso10g0324 10 3482287 3489703 Gso3g1382 3 39795019 39803028 PCT