Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0324 ATGGCCACGCACGTGAGTCACGTGATAGTAGCGGCAGCATTTCTTCTACTTCTTCTCCCTTTCTCTTTCTCCTTCTCCATCTCCCATTCTCACCGATCCGCTGCAATCAACCTCTTCGCTGCCACTCCCACAAGCTTAGAAGACGCGTACGAGGCGCTTAGAGTTTTTCAGATTCTCGGAATCGAAGAGAAGAATACTCCTGTGAACGAGGACACGTGTCAGAAAGTAGTTGAAAGTCTAGCCTCGTCTTCTCCTCTCAAGGATTTGTTCTATGCCTTGAAAGTTAACGCCATTTTAAAATGCAATGTCAATGGGAACGTTTTTAAGGATATTGCTTCAAGACTTAAAGCCACTGTTCATGATGCGAGTGCTTTGCTTGACATCTACTATTCAATTGGAGGTTTGGTTGTTATAAAGGATCAGGATTCTAATGTTGATGTGCTTCTTGCTGATGTTGATGGGGTTTTCCAATCAATCAAGGTTCTCAGTCAAAGTGACGGAAGATGGCGCTATAGTTCTGATAATCCAGAGTCTAGTACCTATGCTGCTGGATTAGCTCTTGAATCCCTTGCTGGATTGATCTCACTAGCTTCTTCTGAATTTGATCAATCTAAGGTCAACGTAGTGAAAAATGGCATAGTAAAGCTTTTTGATGGCATTGAGAAATATGAGGATGGAACCTTTTATTTTGATGAGAAATATGTTGGTGGACATGAGCAACGGGGTTCTCTTTCCACAACTTCTTCAGTTGTTAGAGGGGTTACTGCATTTGCTGCTGTAACTTCTGGAAAAATAAATCTTCCAGGGGATAAAATATTGGGTCTGGCAAAATTTTTCTTGGGCATTGGAATCCCTGGAGATGCCAAGGACTTCTTCAATCAAGTTGAGTCATTAGCTTTTCTAGAGAGCAACAGGATTTCCATTCCATTGATATTGTCACTCCCAGAAACAGTTTATTCATTGACCAAGAAAGGCCAGCTTAAGGTCAAGGTGAATACAGTGCTTGGTTCAGCTGCACCACCGTTAACAGTGAAGCTTGTCCGTGCTTTTAGCACAGGTGCAAAAGATTCAGCTATTATTGACAGCAAGGAGCTCCGGTATGACCAAGAAAGTGGATTTCATGTCTTGGATGCTTTGCCGAAGAATGTGGATGTGGGGACATATGTGTTTGTTTTTGAGATTGTGCTTCATGATTTTGGCAGTGAAAAAGTTTATGCAACTGGAGGCCAAATTCATGTACCAATATATGTCACTGGAATTATTGAAGTTGGTAATGCAGAAATCACAGTTCTTGACAGTGATCTTGGAAGTGCTGAAACCCAGAAAAAGCTAGATTTGGCTGGAAATGATGCCGTTTCACTCTCAGCTAACCACCTGCAGAAGTTGAGGTTTTCTTTCCAATTGACAACTCCTCATGGTCATGTTTTTAAGCCTCATCAGGCGTTTTTCAAGTTGAGACATGAGACAAAGGTTGAACACATCTTTGTGGTTGGAAATACCGGCAAGAAGTTTGAGAAAGTTCTCGATTTTCTTGGCTTGGTGGAGAAACTTTTCTATCTCTCGGGAAAATATGAAATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTACGGCTACTTGGCCATGTTGAATTAGATCTTCCAGAAGCACCTGAGAAAGCACCCCGTCCTCCACCACCACCTGTTGATCCTTACTCAAGATATGGGCCCAAAGCAGAGATTACCCATATATTCAGGTCTCCTGAAAAGAGACCTCACCAGGAACTCTCTCTTGCTTTCTTGGGTTTGATCCTTTTGCCATTCATTGGCTTTTTGGTTGGGTTATTGCGCTTGGGGGTGAACCTAAAGAATTTCCCTGGTTCAACAGTACCTGCCACATTTGGGATCCTTTTCCATGTTGGTATTGCGGCGGTTTTGTTACTTTATGTACTTTTCTGGTTGAAGCTGGACCTGTTCACTACACTCAAAGCATTTGGTCTTTTGGGAGCTATACTGATGTTTGTGGGGCACAGAATTCTTTCTCATCTCGCTTTTACATCTGCCAAGTTGAAATCTGCATGA 2070 0.4246 MATHVSHVIVAAAFLLLLLPFSFSFSISHSHRSAAINLFAATPTSLEDAYEALRVFQILGIEEKNTPVNEDTCQKVVESLASSSPLKDLFYALKVNAILKCNVNGNVFKDIASRLKATVHDASALLDIYYSIGGLVVIKDQDSNVDVLLADVDGVFQSIKVLSQSDGRWRYSSDNPESSTYAAGLALESLAGLISLASSEFDQSKVNVVKNGIVKLFDGIEKYEDGTFYFDEKYVGGHEQRGSLSTTSSVVRGVTAFAAVTSGKINLPGDKILGLAKFFLGIGIPGDAKDFFNQVESLAFLESNRISIPLILSLPETVYSLTKKGQLKVKVNTVLGSAAPPLTVKLVRAFSTGAKDSAIIDSKELRYDQESGFHVLDALPKNVDVGTYVFVFEIVLHDFGSEKVYATGGQIHVPIYVTGIIEVGNAEITVLDSDLGSAETQKKLDLAGNDAVSLSANHLQKLRFSFQLTTPHGHVFKPHQAFFKLRHETKVEHIFVVGNTGKKFEKVLDFLGLVEKLFYLSGKYEIELTVGDAVMENSFLRLLGHVELDLPEAPEKAPRPPPPPVDPYSRYGPKAEITHIFRSPEKRPHQELSLAFLGLILLPFIGFLVGLLRLGVNLKNFPGSTVPATFGILFHVGIAAVLLLYVLFWLKLDLFTTLKAFGLLGAILMFVGHRILSHLAFTSAKLKSA* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0324 689 PANTHER RIBOPHORIN II 17 689 IPR008814 GO:0006487|GO:0008250|GO:0016021
Gso10g0324 689 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 17 689 - -
Gso10g0324 689 Pfam Oligosaccharyltransferase subunit Ribophorin II 13 680 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0324 Gso-Chr10 3482287 3489703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0324 K12667 - gmx:100814831 1238.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1377 19 42605562 42615253 Gso10g0324 10 3482287 3489703 PCT
Gso3g1382 3 39795019 39803028 Gso10g0324 10 3482287 3489703 PCT
Gso10g0324 10 3482287 3489703 Gso19g1377 19 42605562 42615253 PCT
Gso10g0324 10 3482287 3489703 Gso3g1382 3 39795019 39803028 PCT