Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1376 ATGGAGCGGTTGAAGTGGGCGCAACTGGGTGAGAGGCTGAAGACCGGTGGGGCCCAGATGGGGCGAATGGTGAGCGGAAAAGTGAAGGAGATGCTTCAGGCGCCGACGCCGGAGTCCAAGATGGTGGACGAGGCCACGCTGGAGACCATGGAAGAACCCAATTGGGGCATGAATCTCAGAATCTGTGGCATGATCAACAGCGACCAGTTCAACGGCTCTGAGGTCGTTAAGGCCATCAAGAGAAAGATCAATCACAAGAGCCCCGTCGTTCAGACCCTCAGCCTTGACCTCCTCGAAGCCTGCGCCATGAATTGCGACAAGGTCTTCTCCGAAATCGCTTCCGAGAAGGTTCTCGATGAGATCATTCGCCTCATCGATAACCCGCAGGCCCATCACCAGACCCGCAGCCGGGCTTTTCAGTTGATTCGGGCCTGGGGCGAGTCCGAGGATCTCGCTTATCTTCCCGTCTTTCGTCAAACTTATATGAGTTTGAAAGGAAGGGATGAACCGGTTGACATGGCGGGAGGAAATTCACCACATGTTCCGTATGCCTCAGAGTCATATGTAGATGCCCCTGAAAGATACCCAATTCCTCAAGCTGAACTACATGATATTGATGATCCAGCAGCTTTCTCTTCTAATTACCAACACATATCAGTTGAAGAGAGGAAAGAGCATCTTGTGGTTGCTCGAAACAGTCTCGAATTGCTCTCTAGCATATTGAATTCTGATGCAGAGCCTAAAACTTTGAAGGAAGATTTAACCGTGAGCTTGTTGGATAAGTGCAAGCAATCTCTCTCTATCATCAAGGGGATAGTGGAAAGCACTACAAACGATGAAGCAACACTTTTTGAGGCTTTATATCTCAATGACGAGCTGCAGCAGATTGTTTCTAAATATGAGGAGTTAGATGCTGCTCAAAGTTCTGGGGCACAACAACCTCAAAATGCTGACACTGACAAGCATGATGCCAAAGCTGTTCAAAACCCCAATGAAGTACCCGAAAATGAAGAATCTGAAGCTGCTCAGAATCTGGATCGAAAGCTTCCCCAAAAGTCTAACACTCTTGAAGTCAATGCAACTGAGGGCGAGAGAGATGATCTTGCTGAAACTAAAATAGTGGATGGTCTTGCTGAAACTAAAATAGTAGATGATGGCACGAAGGAGAAGAATGCTGAATCTAGTTTCAAGCGAGATACCGAATGA 1206 0.4784 MERLKWAQLGERLKTGGAQMGRMVSGKVKEMLQAPTPESKMVDEATLETMEEPNWGMNLRICGMINSDQFNGSEVVKAIKRKINHKSPVVQTLSLDLLEACAMNCDKVFSEIASEKVLDEIIRLIDNPQAHHQTRSRAFQLIRAWGESEDLAYLPVFRQTYMSLKGRDEPVDMAGGNSPHVPYASESYVDAPERYPIPQAELHDIDDPAAFSSNYQHISVEERKEHLVVARNSLELLSSILNSDAEPKTLKEDLTVSLLDKCKQSLSIIKGIVESTTNDEATLFEALYLNDELQQIVSKYEELDAAQSSGAQQPQNADTDKHDAKAVQNPNEVPENEESEAAQNLDRKLPQKSNTLEVNATEGERDDLAETKIVDGLAETKIVDDGTKEKNAESSFKRDTE* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1376 401 PANTHER TOM1-LIKE PROTEIN 2 1 354 - -
Gso3g1376 401 Gene3D - 213 307 IPR038425 -
Gso3g1376 401 PANTHER TOM1-LIKE PROTEIN 1 1 354 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gso3g1376 401 MobiDBLite consensus disorder prediction 359 401 - -
Gso3g1376 401 SUPERFAMILY ENTH/VHS domain 34 167 IPR008942 -
Gso3g1376 401 Gene3D - 28 179 IPR008942 -
Gso3g1376 401 ProSiteProfiles GAT domain profile. 218 305 IPR004152 GO:0035091|GO:0043130
Gso3g1376 401 Pfam VHS domain 39 147 IPR002014 GO:0035091|GO:0043130
Gso3g1376 401 CDD VHS 39 165 - -
Gso3g1376 401 Pfam GAT domain 231 303 IPR004152 GO:0035091|GO:0043130
Gso3g1376 401 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Gso3g1376 401 SUPERFAMILY GAT-like domain 191 303 - -
Gso3g1376 401 MobiDBLite consensus disorder prediction 304 401 - -
Gso3g1376 401 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1376 Gso-Chr3 39682043 39684708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1376 - - gmx:100777747 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1370 19 42487115 42489931 Gso3g1376 3 39682043 39684708 GST