Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1370 ATGGATATGGAGATGAAAGAAGGTGAAGCCCCCGTGTTGTGGTTCGAAACCTCTGACTCTGTCTGTCGTCGACACCAGTTTGAACCCGATGGTCAACTCTCCGTAGTGATTGTCGATGATTCCAGGCCCTTATACCAAAGGGTGGCTGGATCTTTCATGAATAAATTTTTCCCCTCGGGATATCCGTACAGTGTGAATGAAGGCTATCTTAGATACACGCAGTTTCGAGCTGTGCAACACGTTACCAGTGCAGCATTATCAGTTCTATCAACTCAGTCCTTGCTATTTGCTGCAGGGTTGAGGCCCACTCCTGCGCAAGCAACTGCTGTTAGTTGGATTTTAAAGGATGGAATGCAACATGTAGGGAAGCTAATATGTAGCAATTGGGGAGCTAGAATGGATTCTGAACCTAAACGTTGGAGACTATTAGCTGATGCGCTCTATGATATAGGCACTGGCTTGGAAGTGCTTTCTCCATTATGCCCACATCTTTTTCTTGAAATGGCAGGCTTAGGAAATTTTGCAAAGGGGATGGCAGTTGTTGCAGCAAGAGCAACAAGGTTGCCTATATATTCTTCATTTGCCAAAGAAGGAAATCTCAGTGACCTATTCGCTAAAGGAGAGGCTTTTTCAACTCTCTTTAATGTTATTGGAATTGGAGTTGGAATTCAATTAGCATCTACCATCTGTGCATCAATGCAGGGAAAGTTAGTTGCGGGTCCTCTCCTTTCAATAATACATTTATACAGTGTGTCTGAAGAAATGAGAGCAACTCCTATCAATACGTTGAATCCACGAAGAACTGCAATGGTTGTGGCTGATTTTCTCAAGGCAGGAATTGTATCAAGCCCTGCTGATCTAAGATATAGAGAAAATCTGCTGTTCAATGTGCATGTCAAAGAAGATGCTGGAAATGTAAGAGTGGGGAAGGATGTGCACAAGGTCATTAAGCCTTCCAGGCTTCTTGAATTAAAACAAGTGTTCCCTGAGGAGAAGTTTCTCTTAAATTTTGGAAATAAATGCATTGACATGGTATTGGAACAAGATGCTAGTGGTGAAGATGCATTGAGGGGGTGGCTAGTTGCTGCATATGCTGCACAAACACATAGTTTCTCTCATGAGCTCAGTGCTACTAGTGTCCTGCATGAGGCTTATGAGAAAATGAATGGTGTCTTTCCTGTATTCTTAAGGGAATTGCAGAACAAAGGGTGGCACACTGATAGGTTTTTGGATGGAACTGGGAGCCGTTTTGCATTCTAG 1260 0.431 MDMEMKEGEAPVLWFETSDSVCRRHQFEPDGQLSVVIVDDSRPLYQRVAGSFMNKFFPSGYPYSVNEGYLRYTQFRAVQHVTSAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKLICSNWGARMDSEPKRWRLLADALYDIGTGLEVLSPLCPHLFLEMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLFNVIGIGVGIQLASTICASMQGKLVAGPLLSIIHLYSVSEEMRATPINTLNPRRTAMVVADFLKAGIVSSPADLRYRENLLFNVHVKEDAGNVRVGKDVHKVIKPSRLLELKQVFPEEKFLLNFGNKCIDMVLEQDASGEDALRGWLVAAYAAQTHSFSHELSATSVLHEAYEKMNGVFPVFLRELQNKGWHTDRFLDGTGSRFAF* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1370 419 Pfam Vitamin B6 photo-protection and homoeostasis 47 278 IPR006968 -
Gso3g1370 419 PANTHER PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC 6 419 - -
Gso3g1370 419 PANTHER RUS1 FAMILY PROTEIN C16ORF58 6 419 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1370 Gso-Chr3 39635185 39639320 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1370 - - gmx:100820508 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1365 19 42450243 42454143 Gso3g1370 3 39635185 39639320 GST
Gso3g1370 3 39635185 39639320 Gso13g0923 13 23598537 23602563 PCT
Gso13g0923 13 23598537 23602563 Gso3g1370 3 39635185 39639320 PCT