Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1365 ATGGATATGGGGAAGAAAGAAGGTGAAGCCCCCGTGTTGTGGTTCGAAACCTCTGACTCTGTCTGTTGCCAACACCAGTTTGAACCCGATGGTCGACTCTCCGTAGTGATTGTTGATGATTCCAGGCCCCTATACCAAAGGATGGCTGGATCTTTCATGAATAAATTTTTCCCCTCAGGATATCCGTACAGTGTGAATGAAGGCTATCTTAGATACACGCAGTTTCGAGCTTTGCAACATGTTACCAGTGCAGCACTATCGGTGCTATCAACTCAGTCCTTGCTATTCGCTGCAGGGTTGCGGCCCACTCCTGCGCAAGCAACTGCTGTTAGTTGGATTTTAAAGGATGGAATGCAACATGTAGGGAAGCTAATATGTAGCAATTGGGGTGCTAGAATGGATTCTGAACCTAAACGTTGGAGACTACTAGGTTGGGCTGCTGATGTGCTCTATGATATTGGCATTGGCTTGGAAGTGCTTTCTCCATTATGCCCGCATCTTTTTCTTGAAATGGCAGGCTTAGGAAATTTTGCAAAGGGGATGGCTGTTGTTGCAGCAAGAGCAACAAGGTTGCCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGCGACCTATTTGCTAAAGGAGAGGCTTTTTCAACTCTCTTTAATGTTGTTGGAATTGGAGTAGGAATTCAATTAGCATCTACCATTTGTGCATCAATACAGGGAAAGTTGGTTGCGGGTCCTCTCCTTTCAATTATACATTTATACAGTGTGTCTGAAGAAATGAGAGCAACTCCTATCAATACGTTGAATCCACGAAGAACTGCAATGGTTGTGGCTGATTTTCTCAAGGCAGGAATTGTATCAAGCCCTGCTGATTTGAGATATCGAGAAAATCTGCTGTTCAATGTGCAAGTCAAAGAAGACACTGGAAACGTAAGAGTGGGGAAGAATGTGCACAAGGTCATTAAGCCTTCCAGGCTTCTTGAATTAAAACAAGTGTTCCCCGAGGAGAAATTTCTCTTAAATTTAGGGAATAAATGCATTGACATGGTATTGGAACAAGATGCTAGTGGTGAAGATGCACTGAGAGGGTGGCTAGTTGCTGCATATGCTGCACGAACTGAGAGTTCCTCTCATGAGCTCAGTGCTACTAGTGTCCTGCATGAGGCTTATGAGAAAATGAATGGTGTCTTTCCTGTATTCTTAAGGGAATTACAGAACAAAGGGTGGCACACTGATCGGTTTTTGGATGGAACTGGGAGCCGTTTTTCATTCTAG 1269 0.4366 MDMGKKEGEAPVLWFETSDSVCCQHQFEPDGRLSVVIVDDSRPLYQRMAGSFMNKFFPSGYPYSVNEGYLRYTQFRALQHVTSAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKLICSNWGARMDSEPKRWRLLGWAADVLYDIGIGLEVLSPLCPHLFLEMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLFNVVGIGVGIQLASTICASIQGKLVAGPLLSIIHLYSVSEEMRATPINTLNPRRTAMVVADFLKAGIVSSPADLRYRENLLFNVQVKEDTGNVRVGKNVHKVIKPSRLLELKQVFPEEKFLLNLGNKCIDMVLEQDASGEDALRGWLVAAYAARTESSSHELSATSVLHEAYEKMNGVFPVFLRELQNKGWHTDRFLDGTGSRFSF* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1365 422 Pfam Vitamin B6 photo-protection and homoeostasis 47 281 IPR006968 -
Gso19g1365 422 PANTHER PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC 6 422 - -
Gso19g1365 422 PANTHER RUS1 FAMILY PROTEIN C16ORF58 6 422 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1365 Gso-Chr19 42450243 42454143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1365 - - gmx:100804154 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1365 19 42450243 42454143 Gso3g1370 3 39635185 39639320 GST
Gso19g1365 19 42450243 42454143 Gso13g0923 13 23598537 23602563 PCT
Gso13g0923 13 23598537 23602563 Gso19g1365 19 42450243 42454143 PCT