Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1357 ATGTCTAACCCTCAAGACCAGAAACCATGGAAGGCGGAATACGCGAAGTCGGGAAGATCGTCATGCAGGACGTGCAAGAGCCCCATTGCCAGCGAAACGCTGCGTCTCGGAAAGATGGTTCAATCCACCAAATTCGATGGCCTCATGCCCATGTGGAACCATGCTGCTTGCATATTGAAGAAAGCCAATCAGATAAAATTACTTGAAGATGTTGAAAACTTAGAGTCACTTCGTTGGGAAGATCAGCAGAAGATCAGAAAATACATAGAGAGTGGCGGCGGCGGCGGCGGCGGTAGCAGCAGCGGCAGCGCGGCAAAGTCGGACTCCAAGACTGTCAAAGATACTAAATGTGGTATTGAAGTGTCACAAAATTCTCGTGCCACTTGCAAGGATTGCGGTCAAAAAATTATCAAAGGAGAGGTTCGTATATCTACTAAGCCTGGTGGTCAAGGTGCTAAAGGTTTGGCTTGGCACCATGCCAAGTGTCTCATGGAACTATCACCATCAATTGACGTGTATAAGTTATCTGGATGGAACAATCTCTCATCTTCTGATCAATCAGCTGTCAGTGACTTCGCTAAAAAGGGTGGTAGTGATACAAAAATTGAGACTGAGGAGGGTAAAGAATCCACACAACAACAAACTTCCAAAGGTGGGATAAAACGGGGGAAGGATGTTGATAGTGAGCGGAAATCAAAAGTTGCTAAGGCCAAGGGAGATGTGTCTGTGGGCAGCGCAATGTTAGTGAAATCAGGGGAAGCATGTGATCTGGAGAAGAAAATGGAGACCCAGAGCAAAGAACTCTGGGATTTGAAGGACGATCTCAAAAAGCACGTTACAACAACAGAGTTGCGTGAAATGCTGGAAGCCAATGGTCAAGATTCATCAGGATCAGAAATTGATTTACGTGACCGCTGTGCTGATGGAATGATGTTTGGAGCACTTGGTCTTTGCCCAATATGTTCTGGCTTTCTGCGTTACTCTGGAGGAATGTACCGGTGCCATGGCTACATTTCCGAGTGGAGTAAATGTTCTTACTCTACCTGTGAACCAAACCGTATTGAAGGGAAGTGGAAAATCCCAGAAGAAACAAATAATCAGTACCTTAAAAAATGGTTCAAATCTCAAAAAGGGAAGAAACCAGTTAGGATATTGCCTCTTCCATCACCAAGGAAATCTGCTGAAAGTCAAATGATTGCTAGTCAGCATCATCATTCATCAAATAGTGAAAATTTGCGAGATTTGAAAGTTGCTATCTGTGGATTACCTAATGACTCAATTGCAGAATGGAAACGCAAAATTGATGGCATAGGTGGGGTGTTTCATGCAAAAGTAAATAAAGATACTAACTGCTTGGTGGTTGTTGGATCACTCAATGATGAAGCTGAGATGCGGAAGGCAAGGAGGATGAAAAAACCAATAGTCAGAGAGGACTATTTGATTGACTGCATAGAAAGAAAGAAAAGACTTCCATTTGATATGTACAAGGTTGAAATGATTGGTGAGACTTCTAGCATGGTCACCATTAAAGTGAAGGGACGTAGTGCTGTTCATGAGGCTTCTGGCCTACAGGATTCCGGCCACATACTTGAGGAAGGGAAAAGCATATATAACACAACTTTGAATATGTCTGATTTGTCTACTGGTACTAACAGCTACTACATTCTCCAGATAATCGAGGAAGATAAGGGGTCCGATTGCTATGTGTTTCGTAAATGGGGTCGAGTTGGAAATGACAAGATTGGAGGAACAAAGCTGGAGGAAATGTCAAAATCTGATGCAATATGTGAATTCAAACGATTATTCTATGAGAAGACTGGAAACCCTTGGGAGGCGTGGGAACAAAAGACTATCCAGAAGCAACCTGGAAGATTTTTTCCATTGGATATTGACTATGGAGTTAACAAACAGGTCCCAAAAAATAAAAAAAATGATGCTGACAGCAAATTACCTCCTCCATTAATAGAATTGATGAAGATGCTCTTCAATGTGGAAACATACAGAGCTGCCATGATGGAATTTGAGATTAATATGTCTGAAATGCCACTTGGGAAACTGAGCAAAAGCAATATCCAAAAGGGGTTTGAAGCATTGACAGAGATACAAAATCTGTTAAAAATTAGCAATCCTGATCCATCCGTCAAGGAAAGCTTACTCATTAATGCCAGCAATCGGTTCTTCACCATGATCCCTTCTATTCATCCACATATTATTAGGGATGAGGATGACTTTAAGTCCAAGGTGAAAATGTTAGAAGCCCTTCAAGACATTGAAATAGCCTCAAGATTAGTTGGATTTGATGCTAACAATGATGATTCCATTGATGATAATTATAAGAAGCTTCACTGTGATATATCTCCACTTCCTCATGATAGTGAAGAGTTTTGCTTAATTGAAAAGTTTCTCCAGAATACTCATGCCCCCACACATACGGACTGGAGTCTTGAGCTAGAAGAAGTTTTTTCACTTGAAAGGGAAGGTGAATCTGATAAGTTTGCTCCTTACAGGGATAAACTTGGAAACAGAATGCTCCTATGGCATGGTTCTAGGTTGACAAACTTTGTGGGCATTCTTAACCAAGGACTCAGAATTGCACCTCCTGAAGCCCCGGCTACTGGCTATATGTTTGGCAAAGGGGTTTACTTTGCTGACCTGGTCAGCAAAAGTGCTCAGTATTGCTTCACTGATAAGAAAAATCCTGTTGGTCTAATGCTTTTGAGTGAAGTTGCGCTTGGAAATGTCTATGAGCTCAAGAAAGCTAAGTATATGGATAAACCTCCCGAAGGAAAGCACTCTACTAAAGGACTGGGCAAGAAAATGCCACAGGAATCGGAATATGTAAAGTGGAGGGGCAATGTCACTGTTCCTTGTGGCAAACCAGTGCCATCAAATGTCAAGAGTTCTGAGCTCATGTACAATGAGTATATTGTTTATAATACTGCTCAAGTTAAGATGCAATTCTTATTGAAGGTGAGGTTTCATCACAAGAGATGA 2994 0.4178 MSNPQDQKPWKAEYAKSGRSSCRTCKSPIASETLRLGKMVQSTKFDGLMPMWNHAACILKKANQIKLLEDVENLESLRWEDQQKIRKYIESGGGGGGGSSSGSAAKSDSKTVKDTKCGIEVSQNSRATCKDCGQKIIKGEVRISTKPGGQGAKGLAWHHAKCLMELSPSIDVYKLSGWNNLSSSDQSAVSDFAKKGGSDTKIETEEGKESTQQQTSKGGIKRGKDVDSERKSKVAKAKGDVSVGSAMLVKSGEACDLEKKMETQSKELWDLKDDLKKHVTTTELREMLEANGQDSSGSEIDLRDRCADGMMFGALGLCPICSGFLRYSGGMYRCHGYISEWSKCSYSTCEPNRIEGKWKIPEETNNQYLKKWFKSQKGKKPVRILPLPSPRKSAESQMIASQHHHSSNSENLRDLKVAICGLPNDSIAEWKRKIDGIGGVFHAKVNKDTNCLVVVGSLNDEAEMRKARRMKKPIVREDYLIDCIERKKRLPFDMYKVEMIGETSSMVTIKVKGRSAVHEASGLQDSGHILEEGKSIYNTTLNMSDLSTGTNSYYILQIIEEDKGSDCYVFRKWGRVGNDKIGGTKLEEMSKSDAICEFKRLFYEKTGNPWEAWEQKTIQKQPGRFFPLDIDYGVNKQVPKNKKNDADSKLPPPLIELMKMLFNVETYRAAMMEFEINMSEMPLGKLSKSNIQKGFEALTEIQNLLKISNPDPSVKESLLINASNRFFTMIPSIHPHIIRDEDDFKSKVKMLEALQDIEIASRLVGFDANNDDSIDDNYKKLHCDISPLPHDSEEFCLIEKFLQNTHAPTHTDWSLELEEVFSLEREGESDKFAPYRDKLGNRMLLWHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCFTDKKNPVGLMLLSEVALGNVYELKKAKYMDKPPEGKHSTKGLGKKMPQESEYVKWRGNVTVPCGKPVPSNVKSSELMYNEYIVYNTAQVKMQFLLKVRFHHKR* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1357 997 SMART PADR1_2 302 355 IPR012982 -
Gso3g1357 997 Gene3D - 782 997 - -
Gso3g1357 997 SUPERFAMILY ADP-ribosylation 781 996 - -
Gso3g1357 997 MobiDBLite consensus disorder prediction 220 235 - -
Gso3g1357 997 CDD WGR_PARP1_like 527 632 - -
Gso3g1357 997 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 117 203 - -
Gso3g1357 997 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 117 197 IPR001510 GO:0003677|GO:0008270
Gso3g1357 997 PIRSF NAD_ADPRT 3 997 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Gso3g1357 997 SUPERFAMILY BRCT domain 409 497 IPR036420 -
Gso3g1357 997 ProSiteProfiles SAP motif profile. 276 310 IPR003034 -
Gso3g1357 997 Pfam BRCA1 C Terminus (BRCT) domain 409 484 IPR001357 -
Gso3g1357 997 Gene3D - 245 313 - -
Gso3g1357 997 MobiDBLite consensus disorder prediction 88 109 - -
Gso3g1357 997 Gene3D BRCT domain 391 499 IPR036420 -
Gso3g1357 997 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 648 782 IPR036616 GO:0003950
Gso3g1357 997 SMART WGR_cls 537 620 IPR008893 -
Gso3g1357 997 Gene3D - 314 374 IPR038650 -
Gso3g1357 997 SMART zf_PARP_3 120 194 IPR001510 GO:0003677|GO:0008270
Gso3g1357 997 SMART zf_PARP_3 13 90 IPR001510 GO:0003677|GO:0008270
Gso3g1357 997 SUPERFAMILY WGR domain-like 504 630 IPR036930 -
Gso3g1357 997 SMART BRCT_7 409 487 IPR001357 -
Gso3g1357 997 PANTHER DNA LIGASE 50 991 - -
Gso3g1357 997 CDD parp_like 648 992 - -
Gso3g1357 997 Pfam Poly(ADP-ribose) polymerase catalytic domain 792 993 IPR012317 GO:0003950
Gso3g1357 997 ProSiteProfiles PARP alpha-helical domain profile. 647 765 IPR004102 GO:0003950
Gso3g1357 997 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 50 991 - -
Gso3g1357 997 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 120 191 IPR001510 GO:0003677|GO:0008270
Gso3g1357 997 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 13 89 IPR001510 GO:0003677|GO:0008270
Gso3g1357 997 MobiDBLite consensus disorder prediction 385 409 - -
Gso3g1357 997 Pfam Poly(ADP-ribose) polymerase, regulatory domain 648 778 IPR004102 GO:0003950
Gso3g1357 997 MobiDBLite consensus disorder prediction 184 235 - -
Gso3g1357 997 ProSiteProfiles BRCT domain profile. 407 497 IPR001357 -
Gso3g1357 997 MobiDBLite consensus disorder prediction 196 210 - -
Gso3g1357 997 Gene3D - 638 781 IPR036616 GO:0003950
Gso3g1357 997 Pfam WGR domain 537 615 IPR008893 -
Gso3g1357 997 ProSiteProfiles PARP catalytic domain profile. 772 997 IPR012317 GO:0003950
Gso3g1357 997 Pfam PADR1 (NUC008) domain 304 353 IPR012982 -
Gso3g1357 997 Gene3D - 2 109 IPR036957 GO:0003677|GO:0008270
Gso3g1357 997 Gene3D - 110 218 IPR036957 GO:0003677|GO:0008270
Gso3g1357 997 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 10 93 IPR001510 GO:0003677|GO:0008270
Gso3g1357 997 ProSiteProfiles WGR domain profile. 526 625 IPR008893 -
Gso3g1357 997 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 7 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1357 Gso-Chr3 39480587 39489397 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1357 K24070 - gmx:100815900 1999.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1353 19 42266519 42277315 Gso3g1357 3 39480587 39489397 GST