Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1354 ATGAATGCTAGACGAGACAATCGTAACAATAGAGTTTCCCTTTTTGATGGTATTGAGGAGGGTGGCATCAGAGCATCATCTGTTTACTCCTCTTCTCATGAAATTGATGAACATGATAATGAGCAGGCATTGGATGGATTGCAAGATAGAGTCAATCTGCTGAAAAGATTATCAGGTGATATAAATGAGGAGGTGGATAGCCATAACCGCATGCTGGATCGAATGGGGAATGATATGGATTCATCAAGAGGGGTCCTTTCGGGCACTATGGACAAATTTAAAATGGTATTCGAGACCAAATCCAACCAGAGAATGTTCACGCTTGTAGCATCCTTTGTTGTGCTCTTTCTTATAATATACTACCTCACTAGGTATTGA 378 0.4048 MNARRDNRNNRVSLFDGIEEGGIRASSVYSSSHEIDEHDNEQALDGLQDRVNLLKRLSGDINEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSNQRMFTLVASFVVLFLIIYYLTRY* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1354 125 Gene3D - 42 105 - -
Gso3g1354 125 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 34 96 IPR000727 -
Gso3g1354 125 PANTHER GOLGI SNARE BET1-RELATED 1 124 IPR039897 GO:0015031|GO:0030173
Gso3g1354 125 CDD SNARE_Bet1 37 94 IPR039899 -
Gso3g1354 125 SMART tSNARE_6 29 96 IPR000727 -
Gso3g1354 125 PANTHER BET1-LIKE SNARE 1-1 1 124 - -
Gso3g1354 125 SUPERFAMILY SNARE fusion complex 30 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1354 Gso-Chr3 39468381 39472071 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1354 K08504 - gmx:100814836 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1354 3 39468381 39472071 Gso10g0075 10 807212 811777 PCT
Gso10g0292 10 3134338 3137269 Gso3g1354 3 39468381 39472071 PCT