Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0292 ATGAATGCTAGAAGAGATGGTCGCAACAACAGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGGCATCAGAGCATCGTCTCTTTATTCCTCAAGTTCTTCCCATGAAATTGATGAACATGATAATGAACAAGCATTGGATGGATTGCAAGATAGAGTCAATCTGCTTAAAAGATTGTCAGGTGATATAAATGAGGAAGTGGATAGTCATAACCGGATGCTGGATCGTATGGGAAATGATATGGATTCTTCGAGAGGAGTCCTCTCAGGCACTATGGATAAATTCAAAATGGTATTCGAGACAAAATCCAGCCGAAGAATGTTTTCACTTGTAGCATCCTTTGTTGTGCTTTTTCTTATAATATACTATCTGACTAGGTAA 381 0.3885 MNARRDGRNNRVALFDGIEEGGIRASSLYSSSSSHEIDEHDNEQALDGLQDRVNLLKRLSGDINEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSRRMFSLVASFVVLFLIIYYLTR* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0292 126 SUPERFAMILY SNARE fusion complex 33 98 - -
Gso10g0292 126 PANTHER GOLGI SNARE BET1-RELATED 1 126 IPR039897 GO:0015031|GO:0030173
Gso10g0292 126 CDD SNARE_Bet1 39 96 IPR039899 -
Gso10g0292 126 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 36 98 IPR000727 -
Gso10g0292 126 SMART tSNARE_6 31 98 IPR000727 -
Gso10g0292 126 Gene3D - 44 107 - -
Gso10g0292 126 PANTHER BET1-LIKE SNARE 1-1 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0292 Gso-Chr10 3134338 3137269 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0292 K08504 - gmx:100500329 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g0292 10 3134338 3137269 Gso3g1354 3 39468381 39472071 PCT