Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1351 ATGAATTCCGATTGGGACAGCGGCGGCGGTGGCGGTGGCGCGACGCTAATCCCTGGTCTCCCAAACGACGTAGCGGCGTCGATCCTCTCGAAGGTCCCCTACTCCCACCACGGGAGGCTCAAAGCGACATGCAAATCATGGAAACTGCTCCTCTCCTCGAAATCGTTCTTAGCCTCGCTGAACAAACGTAACCACCTTCTCTGCATCTTCCCGCAAGATCCTTCACTCGCTTCACCCTTTCTCTTCGATCCGAACTCGCTCGCGTGGTGCCCGCTCCCTCCCATGCCCTGCAGCCCCCACGTGTACGGCCTCTGCAACTTCGCCGCTGTCTCCGTCGGGCCCCACCTCTATGTCCTTGGTGGGTCCCTCTTCGACACGCGCTCCTTCCCCATCGATCGCCCTTCCCCGTCCTCCGCCACGTTCAGGTTCAACTTCCACGACTTCTCGTGGGAGCCACGCGCCCCAATGCTGTCTCCCAGGGGGAGCTTCGCCTGCGCGGTGGTGCCGGCCGGCGGGAGCATTTATGTGGCCGGCGGGGGTTCGAGGCATACGATGTTCGGGGCGGCCGGGTCGAGGATTCGGTCGGCGGAGCGGTATGAGGTGGGGAGAGACCGGTGGGTGCCGATGGAGAATCTTCCCGGGTTTCGCGCCGGGTGTGTCGGGTTTGTCGGAGGGGAGGGGAGGGAGTTCTGGGTGATGGGGGGGTACGGCGCGTCGAGGACGATTTCCGGGGTGTTTCCGGTGGATGAGTATTATAGGGATGCGGTGGTGATGGGAGTGGAGAGTGGCGCGTGGAGAGAGGTTGGGGATATGTGGGGGAATGGGGAGAGGGTCAGGGTTGGGAAGATTGTTGTGGTTGATGATAATGGATGCCCCATGCTTTTCATGCTTGATGCCAATGAGATTTTGAGATATGACATGTCTTCTAATCGTTGGCTATACGAGTCTCGTGTGCCAAGAAAAGCTCCTTACAATTCGTCCTTTGGTGTTGTTGTGTTAGACGGGGAGCTTTATGTAGTGACACATTTATGTGTCGTTGATTTTACAGAAACACGAAGGTCCAGACAACATAAGAGGGCAGGAACTCTGTTCATTCAAATATATGACCCAAAAAAGAAGACATGGAGATCGCTTGTTGCAAAATCACCTTTCCATTACCCTATAGATATTAATAGTGCTGTATTGAGCTCAATTTGTCTATGA 1203 0.5603 MNSDWDSGGGGGGATLIPGLPNDVAASILSKVPYSHHGRLKATCKSWKLLLSSKSFLASLNKRNHLLCIFPQDPSLASPFLFDPNSLAWCPLPPMPCSPHVYGLCNFAAVSVGPHLYVLGGSLFDTRSFPIDRPSPSSATFRFNFHDFSWEPRAPMLSPRGSFACAVVPAGGSIYVAGGGSRHTMFGAAGSRIRSAERYEVGRDRWVPMENLPGFRAGCVGFVGGEGREFWVMGGYGASRTISGVFPVDEYYRDAVVMGVESGAWREVGDMWGNGERVRVGKIVVVDDNGCPMLFMLDANEILRYDMSSNRWLYESRVPRKAPYNSSFGVVVLDGELYVVTHLCVVDFTETRRSRQHKRAGTLFIQIYDPKKKTWRSLVAKSPFHYPIDINSAVLSSICL* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1351 400 Pfam F-box domain 19 56 IPR001810 GO:0005515
Gso3g1351 400 SUPERFAMILY Kelch motif 70 378 IPR015915 GO:0005515
Gso3g1351 400 Gene3D - 60 386 IPR015915 GO:0005515
Gso3g1351 400 SMART fbox_2 20 60 IPR001810 GO:0005515
Gso3g1351 400 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 13 400 - -
Gso3g1351 400 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 13 400 - -
Gso3g1351 400 Pfam Kelch motif 165 213 IPR006652 GO:0005515
Gso3g1351 400 Pfam Kelch motif 104 156 IPR006652 GO:0005515
Gso3g1351 400 SUPERFAMILY F-box domain 12 71 IPR036047 GO:0005515
Gso3g1351 400 SMART kelc_smart 115 170 IPR006652 GO:0005515
Gso3g1351 400 SMART kelc_smart 173 225 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1351 Gso-Chr3 39429567 39434140 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1351 - - gmx:100820159 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1350 19 42236753 42241504 Gso3g1351 3 39429567 39434140 GST