Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1344 ATGACGTCAACGTCTTCTTCAGCGCCTCATTACAGTTCTCTCCCCTCGCCCTCATCATCTAACTCCACTGCCTCCTATTTCGTCACACGCCCCGCGACAACCACGCGCTCTTCTTTCGCCACGCGCCGACCATGGGAAGAGGTGTTCGCGCTCTTCTCATTCACGCGCCCTTACTCGATCGGCGAAGCGACGATGCGCGTGAGGCGCAACCTCGATCACTTCCGCGTGAACTACTTCATGATCGTGCTGTTCGTTTTGTTCCTGAGCCTCCTCTGGCACCCGGTCTCGATCATCGTGTACTTGGTGGCGCTCGTGGTGTGGTTCTTCCTCTACTTCTTCCGCGACGAGCCCTTGGTGGTGTTGGGCACTGCGGTGGATGATAGGGCGGTGGCGACGGTTCTTGCGGCGGCGACCGTCGTGGGATTGGTGCTCACCGGCGTGTGGGTGAACGTGGTGGGTTCGGTGATCATTGGGATTGTGCTGGTGGTGTTGCACGCTTCGTTTAGGAGCACGGAGGATTTGTACGTGGATGAGCACGATGGAGGGTTGCTTTCGTTCGTTGGGGGTACCCCTACGAAAGGAACGGGAGGGTACACACTTATATAA 606 0.5776 MTSTSSSAPHYSSLPSPSSSNSTASYFVTRPATTTRSSFATRRPWEEVFALFSFTRPYSIGEATMRVRRNLDHFRVNYFMIVLFVLFLSLLWHPVSIIVYLVALVVWFFLYFFRDEPLVVLGTAVDDRAVATVLAAATVVGLVLTGVWVNVVGSVIIGIVLVVLHASFRSTEDLYVDEHDGGLLSFVGGTPTKGTGGYTLI* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1344 201 MobiDBLite consensus disorder prediction 1 24 - -
Gso3g1344 201 PANTHER PRA1 FAMILY PROTEIN 19 192 - -
Gso3g1344 201 Pfam PRA1 family protein 38 178 IPR004895 -
Gso3g1344 201 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 19 192 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1344 Gso-Chr3 39334457 39335062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1344 K20359 - gmx:100816074 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1346 19 42163185 42164802 Gso3g1344 3 39334457 39335062 GST
Gso3g1344 3 39334457 39335062 Gso2g1170 2 14619020 14620686 PCT
Gso3g1344 3 39334457 39335062 Gso10g0278 10 2924309 2925959 PCT
Gso2g1170 2 14619020 14620686 Gso3g1344 3 39334457 39335062 PCT
Gso10g0278 10 2924309 2925959 Gso3g1344 3 39334457 39335062 PCT