Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1346 ATGTCGTCAGCGTCTTCTCCAGCGCCTCATTATAGTTCTCTCCCCTCGCCCTCATCATCTAACTCCACTAACTACTTCCTCACACGCGCCGCGACATCCACGCGCTCCTCTTTCGCCACGCGTCGACCATGGGAAGAGGTGTTCGCGCTCTACTCCTTCACGCGCCCTTACTCGATCGGGGAAGCGACGATGCGCGTGAGGCGCAACCTCGACAACTTCCGCGTGAACTACTTCATGATGGTGCTGTTCGTTTTGTTCCTGAGCCTCCTCTGGCACCCAGTCTCGATCATCGTGTACTTGGTGGCGCTGGTGGCGTGGTTCTTCCTCTACTTCTTCCGCGACGAGCCCGTGGTGGTGTTCGGCAACGTGGTGGATGATAGGGTGGTGGCGGCGGTTCTAGCGGCGGCGACAGTCTTGGGATTGGTGCTCAGCGGCGTGTGGGTGAACGTGGTGGGTTCGGGGATCGTTGGCGTTGGGGTTGTGGTGTTGCACGCTGCGTTTAGGAGCACGGAGGATTTGTACGTGGATGAACACGATGGAGGGTTGCTTTCGTTCGTTGGGGGCACCCCTACGAAACGAACGGGAGGGTACACACTAATATAA 603 0.5821 MSSASSPAPHYSSLPSPSSSNSTNYFLTRAATSTRSSFATRRPWEEVFALYSFTRPYSIGEATMRVRRNLDNFRVNYFMMVLFVLFLSLLWHPVSIIVYLVALVAWFFLYFFRDEPVVVFGNVVDDRVVAAVLAAATVLGLVLSGVWVNVVGSGIVGVGVVVLHAAFRSTEDLYVDEHDGGLLSFVGGTPTKRTGGYTLI* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1346 200 PANTHER PRA1 FAMILY PROTEIN 19 191 - -
Gso19g1346 200 Pfam PRA1 family protein 37 177 IPR004895 -
Gso19g1346 200 MobiDBLite consensus disorder prediction 1 21 - -
Gso19g1346 200 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 19 191 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1346 Gso-Chr19 42163185 42164802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1346 K20359 - gmx:100794255 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1346 19 42163185 42164802 Gso3g1344 3 39334457 39335062 GST
Gso19g1346 19 42163185 42164802 Gso2g1170 2 14619020 14620686 PCT
Gso19g1346 19 42163185 42164802 Gso10g0278 10 2924309 2925959 PCT
Gso2g1170 2 14619020 14620686 Gso19g1346 19 42163185 42164802 PCT
Gso10g0278 10 2924309 2925959 Gso19g1346 19 42163185 42164802 PCT