Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1339 ATGGCTTCATCACTCGCAACCATACTCGTCGCCTTGCCCCAAACCCCGCAATGCCGTAGCACCTTCCGATCCGATCCACCCAAACTATCCCTAACCCTAAAACCCAAGGCCACTGTTACATGTAAGGCCACCCTGTCCACTACCCTGGAGACTAGCATCCAGCAGCAGCAGCAGCAAGATGACCAAAAACAAAAGCCCGTGGCCGAGGTGTGGCGCAAGATCCACGGGGAGGACAACTGGGCCGGGCTTCTGGACCCGATGGACCCGGTTATGCGAGGCGAGCTGACCCGCTACGGCGAGATGGCCCAGGCCTGCTACGACGCATTCGACTTCGACCCGTACTCCAAATACTGCGGCAGCTGCAGGTTCCCCTTGCCCGAATTCTTCGACTCCCTGGGCATGACCAACGTGGGCTACACCATGACGCGGTACCTCTACGCCACCGCCAACATCAACCTCCCGAACTTCTTCCGCAAGTCACGCTGGCCTCACAAGATGTGGAGCAAGCACGCCAACTGGGCGGGCTTCATCGCCGTCTCCGACGATGAAACCAGCAAGCGCCTCGGCCGCAGAGACATCGTTATCTCGTGGCGAGGCACCGTCACCCACGTGGAGTGGGTGGCGGATTTGCTGAATTTCCTGAAACCGATCTCCCCTGACATTCCCTGTTCAGACAGGAAAGTCAAGGTAGAGGCCGGTTTCTTGGATCTGTACACGGACAGGGAGCCAGGGTGCGGGTACTGTAAGTACTCTGCGAGGGAACAGGTTTTGGGAGAGGTGAAGCGGTTGATGGAGAAGTATGCGGACGAGGAGGTTAGTGTTACGATAGCCGGACATAGCCTTGGGAGTGCGATGGCGATATTGAGTGCCTTTGATATTGTTGAAACTGGGGTGAATGTGGGGAAGGATGGGAGAAAAGCGCATGTTTCGGTGTTTTCGTTTTCGGGGCCGAGGGTGGGGAATGTTAGGTTTAAGGAGAGGTTGGAGGGGGAGCTTGGGATTAAGGTGCTGAGGGTGCATAATGCTCATGACATGGTGCCACAGTCGCCGGGGTTGATTTTCAACGAGGATTCGCCGCAGTGGTTGCTGAAGCTGGTGGAGGGGTGGTTTCCGTGGTGTTACTTGCACGTTGGAGAGGAGTTGCAGTTGGACCATAAGAAATCCCCGTTTCTCAACCCTGACGGGGATGCTTCCTGCGCCCATAACTTGGAGGCTCACTTGCACTTGCTAGATGGATACCATGGGAAGAATCGTGGATTTGAGCGAACAAGTGAGAGGGACCTTGCTCTGGTGAACAAGGACTGTGACTTCTTGAAAGATGAGCATTCGGTGCCACCACGGTGGAGGCAAGACTTGAACAAAAACATGGTCAGGACTGAAGATGGACGCTGGGTGCTCGCTGATCGTCCACTAGCTCAAGATCCACATGAAGATATTGATCATCATCTCGGAGAGCTAGGCCTCGCTTCTTCTCATACTCACACTCATACTCATAATTGA 1500 0.5507 MASSLATILVALPQTPQCRSTFRSDPPKLSLTLKPKATVTCKATLSTTLETSIQQQQQQDDQKQKPVAEVWRKIHGEDNWAGLLDPMDPVMRGELTRYGEMAQACYDAFDFDPYSKYCGSCRFPLPEFFDSLGMTNVGYTMTRYLYATANINLPNFFRKSRWPHKMWSKHANWAGFIAVSDDETSKRLGRRDIVISWRGTVTHVEWVADLLNFLKPISPDIPCSDRKVKVEAGFLDLYTDREPGCGYCKYSAREQVLGEVKRLMEKYADEEVSVTIAGHSLGSAMAILSAFDIVETGVNVGKDGRKAHVSVFSFSGPRVGNVRFKERLEGELGIKVLRVHNAHDMVPQSPGLIFNEDSPQWLLKLVEGWFPWCYLHVGEELQLDHKKSPFLNPDGDASCAHNLEAHLHLLDGYHGKNRGFERTSERDLALVNKDCDFLKDEHSVPPRWRQDLNKNMVRTEDGRWVLADRPLAQDPHEDIDHHLGELGLASSHTHTHTHN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1339 499 PANTHER PHOSPHOLIPASE A1 1 488 - -
Gso3g1339 499 Pfam Lipase (class 3) 194 351 IPR002921 GO:0006629
Gso3g1339 499 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 1 488 - -
Gso3g1339 499 SUPERFAMILY alpha/beta-Hydrolases 155 412 IPR029058 -
Gso3g1339 499 CDD Lipase_3 144 385 - -
Gso3g1339 499 Gene3D alpha/beta hydrolase 70 479 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1339 Gso-Chr3 39288507 39297781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1339 55 488 Acyl Lipid Metabolism Gene Families AT2G30550 60.909 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1339 - - gmx:100815007 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1339 3 39288507 39297781 Gso2g1176 2 14666660 14675605 PCT
Gso2g1176 2 14666660 14675605 Gso3g1339 3 39288507 39297781 PCT