Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1176 ATGGCTGCTTCATTCTCAAGCATGCTCATTATTCCCTCTTCCAAAATAAGCTACGAAGCTAGCTTGGGAGGATTAAGCTTCCACAACTTCCTAACAGCAAAATCACCACCTCTGAAGCGAAACCAAAAGTCAATAAAAGTTGTTACACGCGATAACCACTCACCCCTGGTCGACGACCTCATGATAGAAGTACAAGAACATGAACATGAACATGCAACGCTGCATCAGAAAGATCTCTCAGAAATGTGGCGCCAAATCCACGGTGAGAAGAACTGGGAAGGGCTTCTAGACCCCATGGACCCTCTTTTGAGGTCGGAGGTGATCCGCTACGGCGAGCTGGCGCAGGCCTGCTACGACGCCTTCGACTACGAGCCATTCTCTAGGTTCTGCGGCACATGCAGGTTCGAGGAGGAGAAGTTCTTCTCCTCCCTGGGCATGACCCACCACGGGTACAAGGTGACGCGCTACATCCACCTCACGGCCAACACCGACTTCCTCCTAAAGTGGTTGATTCACTCGAAGTGGCCAACGGCGTGGAGCAAGGTGAACTGGGGCGGATATGTGGCAGTTTCGGACGACGCCACGAGTCGCCGCCTCGGGAGAAGAGACATCGTGATTGCATGGCGGGGGACGGCCACACACCTGGAGTGGGTGGAGGACTTCAAGACTAGCCTCACACCTGTATCATCCAAGGGCATCCCGTGCCACGATGATGGGGTTAAGGTCGACAATGGGTTCTTAGATATGTACACGGGTAAAGATGAGACATCAGAATACTGCCAGCACTCGGCGAGAGATCACGTTCTAAGGGAGGTGAAGCGGTTGATGGACATGTATAGTGAGGAGGAAGTGAGCATTACGGTGACGGGGCATAGTCTGGGGAGTGCTTTGGCGATTTTGAGCGCTTATGATATTGTCGAAAAGGGGTTGGACAGGGGTGTGCCAGTTTCGGTGATGTCATTTTCTGGTCCCGCGGTTGGGAACAAGTCTTTCAAGAACAGGTTGAATAGGCTTGGGGTAAAGGTGTTGAGGGTGATCAACGAGAATGATTGGGTGCCCTGGTTGTCTCCTTGGTTGCCTCCTTTTTCATACTGCCATGTTGGAGAGGAACTCAAGTTGGACAACAACAAATCGCCGTTTCTGAAACCCGATAATAATTGTGCCCATAACTTGGAGGTTCTTCTGCATTTGCTCGACGGATACCATGGAGAGCGGGGGGAATTCATGCTAGCGAGTGATAGGGATCATGCTCTGGTGAACAAGGGAGGTGATTTCCTGAAAGAAAGTTACTTGGTTCCACCAAACTGGTGGCAAGATGAAAACAAGGGCTTGAAGAGGAGCTCAGATGGACGCTGGGTACAGCCTGAGCGAACAATTGAGGTCGACGGTTACCCTTAA 1398 0.5143 MAASFSSMLIIPSSKISYEASLGGLSFHNFLTAKSPPLKRNQKSIKVVTRDNHSPLVDDLMIEVQEHEHEHATLHQKDLSEMWRQIHGEKNWEGLLDPMDPLLRSEVIRYGELAQACYDAFDYEPFSRFCGTCRFEEEKFFSSLGMTHHGYKVTRYIHLTANTDFLLKWLIHSKWPTAWSKVNWGGYVAVSDDATSRRLGRRDIVIAWRGTATHLEWVEDFKTSLTPVSSKGIPCHDDGVKVDNGFLDMYTGKDETSEYCQHSARDHVLREVKRLMDMYSEEEVSITVTGHSLGSALAILSAYDIVEKGLDRGVPVSVMSFSGPAVGNKSFKNRLNRLGVKVLRVINENDWVPWLSPWLPPFSYCHVGEELKLDNNKSPFLKPDNNCAHNLEVLLHLLDGYHGERGEFMLASDRDHALVNKGGDFLKESYLVPPNWWQDENKGLKRSSDGRWVQPERTIEVDGYP* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1176 465 Coils Coil 57 77 - -
Gso2g1176 465 PANTHER PHOSPHOLIPASE A1-IGAMMA2, CHLOROPLASTIC 37 462 - -
Gso2g1176 465 CDD Lipase_3 151 374 - -
Gso2g1176 465 Pfam Lipase (class 3) 205 358 IPR002921 GO:0006629
Gso2g1176 465 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 37 462 - -
Gso2g1176 465 Gene3D alpha/beta hydrolase 82 462 IPR029058 -
Gso2g1176 465 SUPERFAMILY alpha/beta-Hydrolases 152 399 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1176 Gso-Chr2 14666660 14675605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1176 73 457 Acyl Lipid Metabolism Gene Families AT2G30550 55.097 2.69e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1176 - - gmx:100778615 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1736 7 39584787 39587226 Gso2g1176 2 14666660 14675605 GST
Gso3g1339 3 39288507 39297781 Gso2g1176 2 14666660 14675605 PCT
Gso2g1176 2 14666660 14675605 Gso3g1339 3 39288507 39297781 PCT