Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1338 ATGCTTCCTTTGCCGTCTTCACTCACCAAACGAAACTCCAACACTATGCAACATTTTCACCCGGAACCCCTCATCGTTCCCACCGTCTCTTCCGACGCAAATCGCGGCGGCAAGAAACGCGGCAACTACAACTGTGGCCGCTGCGGCCTACCTAAGAAGGGCCATGACTGCTCCAGCAAGACCACCCCCACTCCCACCTCTGCTTCTACTGTCACCCCTTCTCACTCCTCTTTCTCCGCCGTTTCCGCCTCCTTCCGCCCGTCGTCCCACCTCCGCCGCGCTCTCTCCTTCGACGAGGATGAGACCGGCAGATTCGATCCGTCGGAGCCTGTTGACGCGTGGCCCGAAGAGGATGATCTGGATTCGTCTGGTTTGCCGGGGAATCTTTTATGGGAAGTTTTGAGGAGACTGCCGCCGGCGGGGCTGTTGTCGGCGGCGAAGGTGAGCAGAGGTTGGAGGGAGATGACGAGGAGTTTGTGGAGGGCAGCGGAGGAGTTAAGGATTAGGGTTCCGGCGTGGGCTCAGGTGGGTTTTGTGTCGTCGATTTTGCAGAAGTGTCCGGGGATTGTGAAACTCTCTCTTAGAATGGAAAGTGACGTGGATTCCACGATGCTTGCTTGTATTGCGTTCTCATGCCTGAATTTGGCATTCTTGGAGATCTCGGTCTCTGATACTGCAGTTAATCGTATCAGCGGGGTTGAGTTAGCTAGATTTGTTGCTGATAAAAAGAGCCTCAAAAGCCTCAAGATGGAAGGTTGTTCTAACCTTGGAGGTTTTGTTCTTTGTTCTTCGAGTCTTTCTACCCTTTGGTTGTCCGATCTGTACTCTCTTTCTAAGATGGTCTTCAATTGTCCTCAGTTGAGAGAGATTTCATTGGAGTTTGCTCACCGAGAAAGTGACAGTACTGATCTTTCAAACATGGTTCAAGGTTTGGGAAGAAGTTGCCCGAGGTTGCAAAACATGCATATATCTTCAATGCGGCTTTCTCATGCTGCTGTGCTTGCTCTTACTGCTGCTAAGTTAAGTGGGCTGCGAATGCTTTCACTTATTCTTGGATCCGAAGTCACTGATGCATCGATTGCTGCAATTGCCTCAAGCTATCTAAATCTGGAATTGCTTGATCTCAGTGGATCCAGTGTTAGTGACAGTGGTGTTAGCATGATTTGCAATGTGTTCTCTGAAACATTGACAAGACTCCTTCTCGCCCTTTGCCCCAATGTGACTTCAAGTGGCATTCAATTTGCTACGGCTCAATTGCCACATCTTGAACTTATGGACTGTGGCATGACCATATGTGAACCTAATTCTCACCATCCAACTGCTGATGAAAATAACCGCAAATTACAGAAAACATCTAGTACTAATCTACACCTTACAAACCAAAAGTTAATCATCAAACATAGCTGTTTAAAGAAACTTAGTTTGTGGGGATGCTCAGGCTTGGATGCCTTGTATTTGAACTGCCCACAACTCAATGATCTAAATCTAAATTCTTGTAGAAATTTACATCCAGAGAGACTGTTGCTTCAGTGCCCCAGTTTAGAAAATGTGCATGCATCTGGTTGTCAAGACATGTTAATTGAGGCCATCCAAAGTCAGGTTTGCAATGCTTTTACTGATATGGAAAACCCTTCACCTTGTAAGCGTTTACCTGATGGCTCCAAAAGGGTTCAGGTTCCTCATTTGGTTAATAGTGAGTCGCCTGAGGATGAGAAGAAGCAAAGGAGAAAGAAGAGACGTCTTTGTAATGTTGTTGTGGATTGA 1764 0.4728 MLPLPSSLTKRNSNTMQHFHPEPLIVPTVSSDANRGGKKRGNYNCGRCGLPKKGHDCSSKTTPTPTSASTVTPSHSSFSAVSASFRPSSHLRRALSFDEDETGRFDPSEPVDAWPEEDDLDSSGLPGNLLWEVLRRLPPAGLLSAAKVSRGWREMTRSLWRAAEELRIRVPAWAQVGFVSSILQKCPGIVKLSLRMESDVDSTMLACIAFSCLNLAFLEISVSDTAVNRISGVELARFVADKKSLKSLKMEGCSNLGGFVLCSSSLSTLWLSDLYSLSKMVFNCPQLREISLEFAHRESDSTDLSNMVQGLGRSCPRLQNMHISSMRLSHAAVLALTAAKLSGLRMLSLILGSEVTDASIAAIASSYLNLELLDLSGSSVSDSGVSMICNVFSETLTRLLLALCPNVTSSGIQFATAQLPHLELMDCGMTICEPNSHHPTADENNRKLQKTSSTNLHLTNQKLIIKHSCLKKLSLWGCSGLDALYLNCPQLNDLNLNSCRNLHPERLLLQCPSLENVHASGCQDMLIEAIQSQVCNAFTDMENPSPCKRLPDGSKRVQVPHLVNSESPEDEKKQRRKKRRLCNVVVD* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1338 587 MobiDBLite consensus disorder prediction 546 577 - -
Gso3g1338 587 Gene3D Ribonuclease Inhibitor 443 575 IPR032675 -
Gso3g1338 587 Gene3D Ribonuclease Inhibitor 116 298 IPR032675 -
Gso3g1338 587 ProSiteProfiles F-box domain profile. 119 163 IPR001810 GO:0005515
Gso3g1338 587 MobiDBLite consensus disorder prediction 96 118 - -
Gso3g1338 587 Pfam F-box-like 125 161 IPR001810 GO:0005515
Gso3g1338 587 MobiDBLite consensus disorder prediction 96 111 - -
Gso3g1338 587 MobiDBLite consensus disorder prediction 57 77 - -
Gso3g1338 587 MobiDBLite consensus disorder prediction 28 77 - -
Gso3g1338 587 SUPERFAMILY F-box domain 122 166 IPR036047 GO:0005515
Gso3g1338 587 SUPERFAMILY RNI-like 179 411 - -
Gso3g1338 587 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 27 586 - -
Gso3g1338 587 PANTHER F-BOX/LRR-REPEAT PROTEIN 17-LIKE ISOFORM X1 27 586 - -
Gso3g1338 587 Gene3D Ribonuclease Inhibitor 299 440 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1338 Gso-Chr3 39280165 39287071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1338 - - gmx:100811082 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1341 19 42117896 42123587 Gso3g1338 3 39280165 39287071 GST