Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1329 ATGGATAGAAATTGTTTTAGCCTTACCAAGAAGAGTTCAGCACTATGTTTAACTCACTGGAACCCCATCAAACGTAAGCCAGAACATCCTTGTGTGGTTGCAATGCTCAGAACACCCTCAGACAACATCACAGGAGAAACAAGAAAAACTAATGCCTACAAAGATAACTTGTTTGATCGTTTAGCAATACACCATCTTTCAAAAAGCGTTCAAGAAGCCACGGGACTCGGTAACAATAAGAGTGGGTATGAGAGCTTGGTTGAGGCAGCTACTGTGGCTAAAATGAAATTTGATCCTATTCAGCAGCAAGAGGTTATCATTCAAGCTCTTCACAGAGCCTTCCCAAAGCCAATACTTTCATTGATAAAGACACTGCTACCACCATCTAAACTCTCAAGGGAATATTTTGCCGTTTTCACCACTTTGTTCTTTGCTTGGTTAGTCGGGCCTTCCGAGGTGAGAGAATCAGAGGTCAACGGGAGAAGGGAAAAAAATGTAGTCTACGTCACAAAATGCAGGTTTTTAGAGGAGACAAATTGTGTAGGGATGTGTATTAATCTCTGCAAAATGCCATCTCAATCGTTTATAAAGGACACTCTGGGGATGCCAGTCAACATGGTGCCCAATTTTGACGACATGAGTTGTGAGATGATATTTGGACAGGAGCCTCCAGCATCAACCGATGATCCAGCACTGAAGCAACCATGCTATAAACTATGCAAGGCATATAAAAAGCATGGAACAGACTGCCTCAGTAGTTAA 762 0.4213 MDRNCFSLTKKSSALCLTHWNPIKRKPEHPCVVAMLRTPSDNITGETRKTNAYKDNLFDRLAIHHLSKSVQEATGLGNNKSGYESLVEAATVAKMKFDPIQQQEVIIQALHRAFPKPILSLIKTLLPPSKLSREYFAVFTTLFFAWLVGPSEVRESEVNGRREKNVVYVTKCRFLEETNCVGMCINLCKMPSQSFIKDTLGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCYKLCKAYKKHGTDCLSS* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1329 253 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 21 249 - -
Gso3g1329 253 Pfam Beta-carotene isomerase D27-like, C-terminal 146 226 IPR025114 GO:0005506
Gso3g1329 253 PANTHER BETA-CAROTENE ISOMERASE D27 21 249 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1329 Gso-Chr3 39202680 39208561 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1329 K17911 - gmx:100813404 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1331 19 42035246 42038223 Gso3g1329 3 39202680 39208561 GST
Gso3g1329 3 39202680 39208561 Gso2g1187 2 14790412 14794851 PCT
Gso2g1187 2 14790412 14794851 Gso3g1329 3 39202680 39208561 PCT