Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1331 ATGGATGCAAATTGTTTTAGGCTGAACAAGAGCTCAGCACTATGTTCAACTCACTGGAACACCATCAAACGTAAACCAGAACATCCTTTGTGGCTGCAATGCTCAGAACGCCCTCAGACAAACATCACAGGAGAAACAAGAAAAACTAATGCCTACAAAGATAACTTGTTTAATCGTTTAGCAATACATCATCTTTCAAAAAGCGTTCAAGAAGCCACAGGACTCGGTAACAATAAGAGTGGGTTTGAGAGCTTGGTTGAGGCAGCTACTGTGGCTAAACAGAAATTTGACCCTATTCAGCAGCAAGAGGTTATCATTCAAGCTCTTCACAAAGCATTCCCAAAGCCAATACTTTCATTGATTTTGATGACATGA 375 0.4053 MDANCFRLNKSSALCSTHWNTIKRKPEHPLWLQCSERPQTNITGETRKTNAYKDNLFNRLAIHHLSKSVQEATGLGNNKSGFESLVEAATVAKQKFDPIQQQEVIIQALHKAFPKPILSLILMT* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1331 124 PANTHER BETA-CAROTENE ISOMERASE D27 24 122 IPR038938 -
Gso19g1331 124 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 24 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1331 Gso-Chr19 42035246 42038223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1331 K17911 - gmx:102668346 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1331 19 42035246 42038223 Gso3g1329 3 39202680 39208561 GST
Gso19g1331 19 42035246 42038223 Gso2g1187 2 14790412 14794851 PCT
Gso2g1187 2 14790412 14794851 Gso19g1331 19 42035246 42038223 PCT