Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1318 ATGGCGACTCTGTCCCATGCTGATTCTAGAAGAATGTATTCATGGTGGTGGGACAGTCACATTAGCCCCAAGAACTCGAAATGGCTTCAAGAGAATCTGACAGATATGGATTCCAAGGTGAAGCAAATGATCAAGCTTATTGAAGAAGATGCAGATTCCTTTGCGAGGAGGGCGGAAATGTATTATAAGAAACGCCCAGAGCTTATGAAATTAGTTGAAGAGTTTTACCGGGCATACCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATACGTCAGGCCCATCATACCATGGCCGAAGCATTTCCTAATCAAGGTCCTCCGGCACCAGCAGATGATTCACCTGTAGTTTCTTCCATGGAGACTGAACCACATACACCAGAGACAATCCACTTTTCCTGTGCATTTCTTGACTCAGATGACTTGCAAAAGGATGCTTCAACTCATTTCCATGCCATCAATCGAAATGGATCTTATACTGATGAAGCTGATTCTTGTATAAGCAGAAAGGGTTTGAAACAGCTCAATGATCTGTTCATGTCAGGAGAATCTGTAAGTCATGCAAAGTCTGCAAGAAGGGGGCTTAATTTTCTTGACCCGGAGGAGATTAATGGGAAAGACAATGGAAGCCAAGATACTAGAGCTCAAGTCTTATCCGAGTCTGAACGCATGACCAAAGCCGAGGCCGAAATTTTGGCCTTAAAGAAAGCCCTAGCTAAGTTGGAAAGTGAAAAGGAGACTGGCTTGCTTCAGTATCAGCATAGTTTGGAGAGATTGTTCAATCTGGAATCAGAAATGTCTCATGCAAGAGAGCATTCTCAAGGACTTGATGAACGAGCAAACAAAGCTGAAGCTGAAGTTCAAACCTTGAAGGAAGCTCTTACTGAAATACAGTCTGAAAGAGAAGCTAGTTTTCTTCAGTACCAGCAATGCTCGGAGAAATTATATAATCTGGAGAAAAATATTTCTTCGGCTCAAAAGGATGTAGGAGAACTTAATGAACGAGCTACTAGAGCTGAAACTGAAGCTGAATCCTTAAAGCAAGAACTTGCTAGACTAGAAGCTGAAAAGGAGGATGCCCTTGTTCAATATAATCAGTCCTTGGAGATGTTGTCAAAACTAGAGGAAAGATTAACACAAGCTGAAGAGAATGCAATGAGAATTAATGAGCAGGCTATTGCAGCAAAAGATGAAATTGAGGGCATGAAGTTAGAAATTGCTAAACTTACTGAAGAGAAGGAAGATGCAGCTCTTTGTTATCAACAATGCTTGGAGATAATTTCCAGTTTGGAGCATAAACTCTCTTGTGCTCAAGAGGAGGTGCATAGGTTAAATTGCAAGATAAATGATGGGGTTGAAAAGTTGCATAATTCTGAACAGAAGTGTGTTCTCTTGGAAACATCAAATCAGACTCTGCAATCTGAATTGCAGTCTTTGGCACAGAAGTTAGGATTTCAAAGTGAAGAACTTAGTGAGAAGCAGAAGGAATTGGGTAGACTCTGGACTTGCATACAAGAGGAGCGATTGCAATTCATCGAAGCTGAAGCTGCTTTCCAAACTCTTCAGAATTTGCATTCTCAATCTCAGGAAGAGCTAAGGTCTCTTGCCAACGACCTTCACAGTAAGGCTGAAATTCTGGAGAATACAGAATCCCATAAGCAGGCTTTAGAGGATGAAATATACAAGACCAAAGAGGAAAACACAACCCTAAATGAGATCAAATTATCTTCATCTCTGTCTATAAAAAATTTACAGAATGAGATATTAAATCTGAGGGAGATAATAAAGAAACTTGAGCTGGAGGTTGGACTGCAAGTAGATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTAAAAGATGAGCTTAATGATGTGAGTAAAAGACATGAATCCATGATGGAGGATGTCAGATCAACTGACTTAGATCCACAGTGCTTTGTCTCATATGTGAAGAAATTGCAAGATAAGAACTCAAAGCTGAATGAAAGATGCGAAACCTACAAAAACGAGAAAGAAGCTCTAAAGGAAAAACTGGAGATCATGGAAAAGCTCTTGGAGAAGAACACTGTTTTGGAGAGATCCCTTTCAGTTTTGACTGTTGAGCTTGAGAGTACTCGAGGAAAGGTAAAGGTATTGGAGGAAACTTGTGAATCTTTGCTTGCAAAGAAATCCACTCTTGCTTCTGAGAAAGCCACCTTGTTTTCTCAGTTACAAACCACAGCCGAGAAGCTGGAGAATCTCTCAGAAAAAAACCACCTTTTAGAAAGTTCACTATTTGATGTGAATGCTGAGCTTGAAGGATTAAGGATAAAGTCAAAGATTTTAGAAGACTCTTGTCTGTTGTTTGACCATGAAAAGTCCAGTCTCACCTCTGAGAAAGAAATGTTGGTTTCACAGTTGAACATCACTCATCAAACTCTGAAAGATCTTAGGAAAAAACACAGTGAATTGGAACTGAAGCATTTGGAACTGAAAGCAGAAAGGGAGTCTGCACTTCAAAAGTTGGAAGAGCTACTTGTTTCCTTATATGCTGAGAGGGAAGAGCATTCCAGAATTGTGCAATTGAATGACTGTCAATTGGCTGAGAAGGAATTACAGATTTTTGTTCTCCAAGAAGATGCAGATTACCAGAAAAAGGAATATGAAGATGAACTGGACAGAGGTGTGCATGCTCAAATGGAAATTTTCGTGTTGCAGAAATGTATCCAGGATTTAGAGCAGAAGAACTTCTCTCTTCTAGTTGAGTGTCAAAGACTCTTGGAGGCTTCCAAACTGTCTGATAGATTGATATCTAAGTTGGAGAATGACAATGTTCAAAAGCAAGTTGATGTGAATTCGTTGTCTGAGAAAATTAAAATGCTACGGATTGGGCTGCTTCAGGTGTTAAAGACTCTTGACGTTAACAGTGAGCCTTGGTGTGAAGATGTGACTGAAGAAGACCAGGAGCTTCTGAACCACATACATGGCAAACTTCAGGAGACACAGAATTCTTTTGTCACAATTTTCAACGAAAGCCAGCAAGTTGCCATTGAGAATTCAGTTCTTGTTGCATTCCTTGGCCAGTTGAAATTAAAGGCCGGAAATCTTTGGACAGAAAGAGATTCTCTTGATAAGGAGTTGAGAACCCAGTCTAAGCAGTTCTTGGCATTGCAAGCAGAGGTACAAAAGATATTGGAGAAGAATCAGGAATTGAAGTTGGCAATAAGCAAAAGAGAAGAGAAAATGGAAGTAATGACAACTGAAATAGAGAACCTATGCAAACAGCTGTTAGACTTGAAAGAGGATCACCAAAACATAAAGGAAGAAAGTTGCAAAACCTTTGAAGAGAAAAATGCCTTGTTGAGAAGATTTCTGGACCTGGGTGAAGAGAAAAGTAAGTTGGAAGAAGAATTCTGCATTATGATCCATGAGACAATAGCACAATCTAATATTTCTCTGATCTACCAGAACATTCTCTTTGAAAAACTCCAGACACTTAAAGAGCTTAGCCAAGATCTTGATAGACTTTGTTCAGTAAATGCTGATCTTGAGAACAAACTAAAAATAATGATGGGCAAACTAGAAGATGTACAAATGGAAAACTCGGATCTTAAAGAGTCCTTTGTAGTGTCAAGCAATGAACTAAAATTAGTTCAATCCGTTAATGATCAACTAAATTGTCAGATTAGGAATGGAAAGGAATTGTTGTCTCAAAAGGAAAATGAGATTTTGGAAGCAGCAAAAATGTTTAGTGCTTTACATGATGAGAAAAGAGAATTAAAAAGATTGGTGGAAGATCTGAAGAGCAAGTATGATGAAGCCAGGGTGATACTTGAAGACCAAGCTAGTCAAATTTTAAAATTATCCTCAGACAAGGATCTTCAAAATGGTGAACTTGGATGCCTTTGTGAAGTGAATCAGAAGTTGGAGGCTGAAATGAGGCACCTGCATCAAGAACTTGGAGAAATTAAACTGAGGGAAGAGAAGCTAAATTGTGAACTGCTTAAGGGAACAAATGAGATTGAACAATGGGAGACTCAGGCTGCCACACTCTATACCAGACTGCAGATTTCTGCTGTCAATGAAACATTATTTGAAGAGAAGGTCCGTGAGCTAGCTGATGCATGTGAAGATCTTGAACGCAGAAGCAACTTTAAAGGTATGGAAAGTGAAATGCTGAAAGAAAGAGTTAAAAAGTTGGAAGGTGAAAATGGGAGACTACATGGTCAGTTGGCTGCTTATGTCCCTGCTGTTAGTGCTTTGAATGATAGTATAACAGCCTTGGAGATGCAGACACTTGCACAGGTAAATCCTCATAACTACAAAGTATTAAAGGTTGAAGATTTGACGGATCACAAATATGCTGAAGGTGGTCCACAAACAGCTGAAGATCAGAATGCTATGGCAACAGATGCACTTCCAGACTTCCAAGACTTGCAGAAAAGGATCAGTGCAATTGAAATGGCTGTTAAACAGATGAATGAAAGTTTCAAAACTAAGGATGAAATGAGAGAGATTCAAGTATTAAAATCTGGAATCAGCCGGCACCAAGGAAATATTCAGGCAAGCAAGTATGTTACTGAGATGGATGAAGCAAAGGAGCAGCATCGAGGTGGACCTTCTGGTGAACAGAAGGCAAAAAAATCAGTGTCAGATGTCCCTGTAGCAGAAATTGAAGTTCTGCCAAAAGACATCATGCTTGATCAAACGTCTGAATGTTCATACAGGTTAAGTAGGAGAGGAACTCTCGAGAATGATGATCAGATGCTTGAATTGTGGGAAACAGCTAATAAGGATGGGGTAATTGGCCTGACCGTTGGCAAGGCGCAGAAAAAGGCCATCGCACCTACTGGATACCATCAAAAGAGAGCAACCAAGGAACCCAAAAACAAATATCCTTCAGTAGAGTCCTTGATTGAGAAGGATTTGAGTGTGGACAAATTAGAGATCTCGAGAAGATTGACACATCCACATCCACATCCTCATGAAGATGGCAACAGGAGAAAGATTTTAGAAAGACTTGATTCTGATTCTCAGAAGTTGACAAACCTTGAAATTACCGTGCAAGATTTGATGAGCAAGATAGAAATTACAGAGAGCACAAAGGGAAAAGATAGTGAGTATGATACCGTGAAAGGACAGCTAGAAGCTACTCAGGAAGCCATCACAAAGTTGTTTGATGCCAACCAGAAGTTGAAGAAGAATGTAGAAGAGGGTACCTCGTCCTTTGCTGGGAAGTCTACAGCAGAACCGGATGAAACTGGAAGTGCCAGCAGAAGGAGAGTTTCAGAACAGGCTCGGAGAGGGTCTGAAAAAATAGGACGGCTGCAGTTGGAAGTGCAAAGACTGCAATTCTTACTTCTGAAGTTGAATGATGAAAAAGAAGGCAAAGGAAAAGCAATGATGGATGAACGAAATTCAAAAGTTCTTTTGAGAGATTATCTCTATGCTGGTGGCACGAGAAGAAACTACCAGAAGAGGAAGAAGAAAACACACTTTTGTGCATGCATGCAACCTCCCACTAAGGGAGATTAA 5523 0.4003 MATLSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDSKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHHTMAEAFPNQGPPAPADDSPVVSSMETEPHTPETIHFSCAFLDSDDLQKDASTHFHAINRNGSYTDEADSCISRKGLKQLNDLFMSGESVSHAKSARRGLNFLDPEEINGKDNGSQDTRAQVLSESERMTKAEAEILALKKALAKLESEKETGLLQYQHSLERLFNLESEMSHAREHSQGLDERANKAEAEVQTLKEALTEIQSEREASFLQYQQCSEKLYNLEKNISSAQKDVGELNERATRAETEAESLKQELARLEAEKEDALVQYNQSLEMLSKLEERLTQAEENAMRINEQAIAAKDEIEGMKLEIAKLTEEKEDAALCYQQCLEIISSLEHKLSCAQEEVHRLNCKINDGVEKLHNSEQKCVLLETSNQTLQSELQSLAQKLGFQSEELSEKQKELGRLWTCIQEERLQFIEAEAAFQTLQNLHSQSQEELRSLANDLHSKAEILENTESHKQALEDEIYKTKEENTTLNEIKLSSSLSIKNLQNEILNLREIIKKLELEVGLQVDERNALQQEIYCLKDELNDVSKRHESMMEDVRSTDLDPQCFVSYVKKLQDKNSKLNERCETYKNEKEALKEKLEIMEKLLEKNTVLERSLSVLTVELESTRGKVKVLEETCESLLAKKSTLASEKATLFSQLQTTAEKLENLSEKNHLLESSLFDVNAELEGLRIKSKILEDSCLLFDHEKSSLTSEKEMLVSQLNITHQTLKDLRKKHSELELKHLELKAERESALQKLEELLVSLYAEREEHSRIVQLNDCQLAEKELQIFVLQEDADYQKKEYEDELDRGVHAQMEIFVLQKCIQDLEQKNFSLLVECQRLLEASKLSDRLISKLENDNVQKQVDVNSLSEKIKMLRIGLLQVLKTLDVNSEPWCEDVTEEDQELLNHIHGKLQETQNSFVTIFNESQQVAIENSVLVAFLGQLKLKAGNLWTERDSLDKELRTQSKQFLALQAEVQKILEKNQELKLAISKREEKMEVMTTEIENLCKQLLDLKEDHQNIKEESCKTFEEKNALLRRFLDLGEEKSKLEEEFCIMIHETIAQSNISLIYQNILFEKLQTLKELSQDLDRLCSVNADLENKLKIMMGKLEDVQMENSDLKESFVVSSNELKLVQSVNDQLNCQIRNGKELLSQKENEILEAAKMFSALHDEKRELKRLVEDLKSKYDEARVILEDQASQILKLSSDKDLQNGELGCLCEVNQKLEAEMRHLHQELGEIKLREEKLNCELLKGTNEIEQWETQAATLYTRLQISAVNETLFEEKVRELADACEDLERRSNFKGMESEMLKERVKKLEGENGRLHGQLAAYVPAVSALNDSITALEMQTLAQVNPHNYKVLKVEDLTDHKYAEGGPQTAEDQNAMATDALPDFQDLQKRISAIEMAVKQMNESFKTKDEMREIQVLKSGISRHQGNIQASKYVTEMDEAKEQHRGGPSGEQKAKKSVSDVPVAEIEVLPKDIMLDQTSECSYRLSRRGTLENDDQMLELWETANKDGVIGLTVGKAQKKAIAPTGYHQKRATKEPKNKYPSVESLIEKDLSVDKLEISRRLTHPHPHPHEDGNRRKILERLDSDSQKLTNLEITVQDLMSKIEITESTKGKDSEYDTVKGQLEATQEAITKLFDANQKLKKNVEEGTSSFAGKSTAEPDETGSASRRRVSEQARRGSEKIGRLQLEVQRLQFLLLKLNDEKEGKGKAMMDERNSKVLLRDYLYAGGTRRNYQKRKKKTHFCACMQPPTKGD* 1841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1318 1840 Coils Coil 1246 1280 - -
Gso3g1318 1840 Coils Coil 226 246 - -
Gso3g1318 1840 Coils Coil 705 725 - -
Gso3g1318 1840 MobiDBLite consensus disorder prediction 1525 1539 - -
Gso3g1318 1840 Coils Coil 1711 1731 - -
Gso3g1318 1840 Coils Coil 1472 1492 - -
Gso3g1318 1840 MobiDBLite consensus disorder prediction 1749 1767 - -
Gso3g1318 1840 Gene3D - 224 397 - -
Gso3g1318 1840 Coils Coil 803 855 - -
Gso3g1318 1840 Coils Coil 464 498 - -
Gso3g1318 1840 Coils Coil 1358 1378 - -
Gso3g1318 1840 Coils Coil 1769 1789 - -
Gso3g1318 1840 Coils Coil 1050 1105 - -
Gso3g1318 1840 Coils Coil 933 953 - -
Gso3g1318 1840 PANTHER PROTEIN NETWORKED 4A 1 1840 - -
Gso3g1318 1840 MobiDBLite consensus disorder prediction 1649 1670 - -
Gso3g1318 1840 Coils Coil 653 697 - -
Gso3g1318 1840 Coils Coil 1302 1343 - -
Gso3g1318 1840 MobiDBLite consensus disorder prediction 1734 1748 - -
Gso3g1318 1840 Coils Coil 268 302 - -
Gso3g1318 1840 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Gso3g1318 1840 Coils Coil 310 414 - -
Gso3g1318 1840 MobiDBLite consensus disorder prediction 1734 1767 - -
Gso3g1318 1840 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1840 - -
Gso3g1318 1840 Coils Coil 429 449 - -
Gso3g1318 1840 Coils Coil 1113 1133 - -
Gso3g1318 1840 Coils Coil 1218 1238 - -
Gso3g1318 1840 SUPERFAMILY Tropomyosin 397 641 - -
Gso3g1318 1840 Coils Coil 583 631 - -
Gso3g1318 1840 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Gso3g1318 1840 Coils Coil 733 760 - -
Gso3g1318 1840 MobiDBLite consensus disorder prediction 1525 1546 - -
Gso3g1318 1840 Coils Coil 1677 1697 - -
Gso3g1318 1840 MobiDBLite consensus disorder prediction 104 124 - -
Gso3g1318 1840 Coils Coil 520 575 - -
Gso3g1318 1840 Coils Coil 905 925 - -
Gso3g1318 1840 Coils Coil 1162 1196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1318 Gso-Chr3 39036128 39043643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1318 - - gmx:100810726 3490.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1317 19 41865203 41872323 Gso3g1318 3 39036128 39043643 GST
Gso3g1318 3 39036128 39043643 Gso2g1202 2 14992602 15000907 PCT
Gso3g1318 3 39036128 39043643 Gso10g0251 10 2583470 2592581 PCT
Gso2g1202 2 14992602 15000907 Gso3g1318 3 39036128 39043643 PCT
Gso10g0251 10 2583470 2592581 Gso3g1318 3 39036128 39043643 PCT