Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1317 ATGGCAACTCTGTCCCATGCTGATTCTAGAAGAATGTATTCATGGTGGTGGGACAGTCACATTAGCCCCAAGAACTCGAAATGGCTCCAAGAGAATCTGACGGATATGGATTCCAAGGTGAAGCAAATGATCAAGCTGATCGAGGAAGATGCAGATTCATTTGCCAGGAGGGCTGAAATGTATTATAAGAAACGCCCAGAGCTTATGAAATTAGTTGAAGAGTTTTATCGCGCATACCGGGCATTGGCTGAGAGATATGATCACGCAACTGGAGTGATACGTCAGGCCCATCATACTATGGCTGAAGCATTTCCTAATCAAGTCCCTCCTCTGGCACCCGCAGATGATTCACCTGGAGTAACTTCCATGGAGACTGAACCACATACACCAGAGACAATCCACTTTTCCCGTGCCTTTCTTGACTCAGATGACCTGCAAAAGGATGCTTTAACTCATTTCCATGCAATCAGTCGAAATGGATCTTATACTGATGAAGCTGATTCTGGTATAAGCAGAAAGGGTTTAAAACAGCTCAATGATCTGTTCATGTCAGGAGAACCTGTAAGTCATGCAAAGTCTGCAAGAAGGGGGCTTAATTTTCTTGACACGGAGGAGATTAAAGGGCAAGACAACGGAAGCCAAAATACTAGAGCTCAAGTCTTACCCGAGTCTGAACGCATTACCAAAGCCGAGACAGAAATTTTGGCCTTAAAGAAAGTCCTAGCTAAGTTAGAAAGTGAAAAGGAGGCTGGCTTGCTTCAGTATCAGTATAGTTTGGAGAGATTGTCCAATCTGGAATCAGAAATGTCTCATGCAAGAGAGAATTCTCAAGGACTTAATGAACGAGCAAACAAAGCTGAAGCTGAAGTTCAAACCTTGAAGGAAGCTCTTACTAAATTACAGGCTGAAAGAGAAGCTAGTCTTCTTCAGTACCAGCAATGCTTGGAGAAAATATATAATCTGGAGGAAAATATTTCTTCTGCTCAAAAGGATGTAGGAGAACTTAATGAACGAGCAACTAGAGCTGAAACTGCAGCTGAATCCTTAAAGCAAGACCTTGCTAGAGTAGAAGCTGAAAAGGAAGCTGCCCTTGTTCAATATAATCAGTCCTTGGAGATGTTGTCAAAACTAGAGGAGAGACTAATACAAGCTGAAGAGAATGCAAGGAGAATTAATGAGCAAGCTAATGCAGCAAAAGATGAAATTGAGGGCATGAAGTTAGAAATTGCTAAACTTACTGAAGAGAAGGAAGATGCAGCTCTTCGCTATCAACAATGCTTGGAGATAATTTCCAGTATGGAGCATAAACTCTCTTGTGCCCAGGAGGAGGTGCATAGGCTAAATTGCAAGATAAATGATGGGGTTGAAAAGTTACATAGTTCTGAACAGAAGTGTACTCTCTTGGAAACATCAAATCAGACTCTGCAATCTGAATTGCAGTCTTTGGCACAGAAGTTTGGATCTCAAAGTGAAGAACTTAGTGAGAAGCAGAAGGATTTGGGTAGACTCTGGACTTGCATACAAGAGGAGCGATTGCGATTCATCGAGGCTGAAGCTGCTTTCCAAAATCTTCAGAATTTGCATTCTCAATCTCAGGAGGAGCTAAGGTCTCTTGCCACCGAGCTTCATAGTAAGGCTGAAATTCTGGAGAATACGGAATCCCATAAGCAGGCTTTAGAGGATGAAGTACACAAGTCCAAAGAGGAAAACAAAACTCTAAATGAGATCAAATTATCTTCATCTTTGTCTATAAAAAATTTGCAGGATGAGATATTAAATCTGAGGGAGATAATAAAGAAACTTGAGCTGGAGGTTGGACTGCAAGTAGATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGATGAGCTTAATGATGTGAGTAAAAGACATGAATCCATGATGGAGGATGTCAGATCAACTGACTTAGATCCACAGTGCTTTGCCTCATCTGTGAAGAAATTGCAAGATGAGAACTCAAAGCTGAATGAAAGATGTGAAACCTACAAAGATGAGAAAGAAGCTCTAAAGGAAAAACTGGAGATCATGGAGAAGCTTTTGGAGAAGAATGCTGTTTTGGAGAGATCCCTTTTAGTTTTGACTGTTGAACTTGAGAGTGCTCGAGGAAAGGTAAAGATATTGGAAGAAACTTGTGAATCTTTGCTTGGGGAGAAATCCACTCTTGCTGCTGAGAAAGCCACCTTGTTTTCTCAGTTACAAACCACAGTTGAGAAGCTGGAGAAGCTCTCAGAAAAAAACCACCTTTTAGAAAATTCACTATTTAATGTGAATTCTGAGCTTGAAGGATTAAGGATAAAGTCAAAGATTTTAGAAGACTCTTGTCTGTTGTTTGACCATGAAAAGTCCAGTCTCACCTCTGATAAAGAAATGTTGGTTTCACAATTGAACATCACTCATCAAACTCTGAAAGATCTTGGGAAAAAACACAGTGAATTGGAACTGAAGCATTTGGAACTGAAAGCAGAAAGGGAGTCTGCACTTCAAAAGTTGGAAGAGCTACTTGTTTCCTTATATGCTGAGAGGGAAGAACATTCCAGAATTGTGCAATTGAATGACTGTCAATTGGCTGAGAAGGAATTACAAATTTTTGTTCTCCAAGAAGATGCAGATTACCAGAAAAAGGAATTTGAAGAGGAACTGGACAGAGCTACACATGCTCAAATGGAAATTTTCATTTTGCAGAAATGTATCCAGGATTCGGAGCAAAAGAACTTCTCCCTTCTAGTTGAGAGTCAGAGACTCTTGGAGTCTTCCAAACTGTCTGATAGATTGGTATCTAAATTGGAGAATGACAATGTTCAAAAGCAAGTTGATGTGAATTCGTTGTCTGAGAAAATTAAAATACTACGAATTGGACTGCTTCAGGCGTTAAAGACTCTTGACGTTAACAGTGAGCCTAGGTGTGATGGTATTATTGAAGAAGACCAGGAGCTTCTGAACCATATACATGGCAAACTTCAGGAGACACAGAATTCTTTTGTCACCATTTTCAATGAAAGCCAGCAAGTGGCCATTGAGAATTCAGTTCTTGTTGCATTCCTTGGCCAGTTGAAATTAAAGGCTGAAAATCTTTTGACAGAAAGAGATTCTCTTGATAAGGAGTTGAGAACCCAGTCTAAGCAGTTCTTGGCATTGCAAGCAGAGGTACAGAAGATATTGGAGAAGAATCAGGAATTGAAGTTGACAATAAGCAAAGGAGAAGAGAAAACGGAAGTAATGACAACTGAAATAGAGAATCTATGCAAACAGCTGTTAGACTTGAAAGAGGATCACCAAAACATAAAGGAAGAAAGTTGCAAAACCTTTGAAGAGAAAAATTCCTTGATGAAAAGATTTCGGGACCTGGGTGAAGAGAAAAGTAAGTTGGAAGAAGAAATCTGCATTATGATTCACGATACAATAGCACAATCCAATCTTTCTCTGCTTTACCAGAACATTGTCCTTGAAAAACTCCAGGCACTTAAAGAGCTAAGCAAAGATCTTGATAGACTTTGTTCAGTAAATACTGACCTTGAGGAGAAACTAAAAATAATGATGGGCAAATTGGAAGATGTACAAATGGAAAACTCAGATCTTAAAGAGTCCTTGATAGTGTCAAGCAATGAACTAAAATTAGTTCAATCCGTTAATGATCAATTAAATTGTCAGATTAGGAATGGAAAGGAATTGTTGTCTCAAAAGGAAAATGAGATTCTGGAAGCAGCAAAGATGTTTAGCACTTTACATGATGAGAAAACAGAATTGCAAAGATTGGTGGAAGATCTGAAGAGCAAGTATGCTGGAGCCAGGGTGATACTTGAAGACCAAGCTAGTCAAATTTTAAAATTATCCTCAGACAAGGATACTCAGGCTGCCACACTCTATACCAGACTGCAGATTTCTGCTGTCAATGAGACATTATTTGAAGAGAAGGTGCGTGAGCTAGCTGATGCATGTGAAGATCTTGATCGCAGAAGCAACTTTAAAGGTATGGAAAGTGAAACGCTGAAAGAAAGAGTTAACAAATTGGAAGGTGAAAATGGGAGATTACGTAGTCATTTGGCTGCTTATGTCCCAGCTGTCAGTGCTTTGAATGATTGTATAACATCCTTGGAGATGCAGACACTTGCACATGCAAATCCTCATAACTACAAAGTATTAAAGGTTAAAGATTTGACGAATCACAAATATGCTGAAAGTGGTCCACAAACAGGTGAAGATCAGAATGCTATGGCAACAGATGCACTTCCAGACTTCCAAGGCTTGCAGAAAAGGATCAGTGCAATTGAAATGGCTGTTAAACAGATGAATGAAAGTTTCAAAACTAAGGATGAAATGAGAGAGATTCAAGTGTTAAAATCTGGAATCAGCCGGCGCCATGAAAATATTCAAGCAAGCAAGTATGTTGAACAGAAGGCAAAAAAATCAGTGTCAGATGTCCCTGTAGCAGAAATTGAAGTTCTGCCAAAAGACATCATGCTTGATCAAACATCTGAATGTTCATACGGGTTAACTAGGAGAGGAACTCTCGAGAATGATGATCAGATGCTTGAATTGTGGGAAACGGCTAATAAGGATGGCGTTATTGGCCTGACTGTTGGCAAGGTGCAGAAGATGGCCATTGCACCTACTGGATATCATCAAAAGAGAGCAACCAAGGAACCCAAAAACAAATATCCTTCAGTAGAGTCCTTGATTGAGAAGGAGTTGAGTGTGGACAAATTAGAGATCTCAAGAAGATTTACACATCCACATCCACATCCTCATGAAGATGGCAACAAGAGAAAGATTTTAGAAAGACTTGATTCTGATGCTCAGAAGTTGACAAACCTTGAAATTACCGTGCAAGATTTGATGAGCAAGATAGAAATTACTGAGAGCACAAGGGGAAAAGATAGCGAGTATGATACCGTGAAAGGACAGCTTGAAGCTACTCAGGAAGCCATCACAAAGTTGTTTGATGCCAACCAGAAGTTGAAGAAGAATGTAGAAGAGGGTACCTTGTCCTTTGCTGGGAAGTCTACAGCAGAATCAGATGAAAGTGGAAGTGCCAGCAGAAGGAGAGTTTTAGAACAGGCTCGGAGAGGGTCTGAAAAAATAGGACGGCTGCAGTTCGAAGTGCAAAGACTGCAATTCTTACTTCTGAAGTTGAATGATGAAAAAGAAGGCAAAGGAAAAGCAACGATGGATGAACGAAATTCAAAAGTTCTTTTGAGAGATTATCTCTATGGTGGTGGGACGAGAAGAAGCTACCAGAACAAAAAGAAGAAAGCACCCTTTTGTGCATGCATGCAACCTCCCACTAAGGGAGATTAA 5322 0.3995 MATLSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDSKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHHTMAEAFPNQVPPLAPADDSPGVTSMETEPHTPETIHFSRAFLDSDDLQKDALTHFHAISRNGSYTDEADSGISRKGLKQLNDLFMSGEPVSHAKSARRGLNFLDTEEIKGQDNGSQNTRAQVLPESERITKAETEILALKKVLAKLESEKEAGLLQYQYSLERLSNLESEMSHARENSQGLNERANKAEAEVQTLKEALTKLQAEREASLLQYQQCLEKIYNLEENISSAQKDVGELNERATRAETAAESLKQDLARVEAEKEAALVQYNQSLEMLSKLEERLIQAEENARRINEQANAAKDEIEGMKLEIAKLTEEKEDAALRYQQCLEIISSMEHKLSCAQEEVHRLNCKINDGVEKLHSSEQKCTLLETSNQTLQSELQSLAQKFGSQSEELSEKQKDLGRLWTCIQEERLRFIEAEAAFQNLQNLHSQSQEELRSLATELHSKAEILENTESHKQALEDEVHKSKEENKTLNEIKLSSSLSIKNLQDEILNLREIIKKLELEVGLQVDERNALQQEIYCLKDELNDVSKRHESMMEDVRSTDLDPQCFASSVKKLQDENSKLNERCETYKDEKEALKEKLEIMEKLLEKNAVLERSLLVLTVELESARGKVKILEETCESLLGEKSTLAAEKATLFSQLQTTVEKLEKLSEKNHLLENSLFNVNSELEGLRIKSKILEDSCLLFDHEKSSLTSDKEMLVSQLNITHQTLKDLGKKHSELELKHLELKAERESALQKLEELLVSLYAEREEHSRIVQLNDCQLAEKELQIFVLQEDADYQKKEFEEELDRATHAQMEIFILQKCIQDSEQKNFSLLVESQRLLESSKLSDRLVSKLENDNVQKQVDVNSLSEKIKILRIGLLQALKTLDVNSEPRCDGIIEEDQELLNHIHGKLQETQNSFVTIFNESQQVAIENSVLVAFLGQLKLKAENLLTERDSLDKELRTQSKQFLALQAEVQKILEKNQELKLTISKGEEKTEVMTTEIENLCKQLLDLKEDHQNIKEESCKTFEEKNSLMKRFRDLGEEKSKLEEEICIMIHDTIAQSNLSLLYQNIVLEKLQALKELSKDLDRLCSVNTDLEEKLKIMMGKLEDVQMENSDLKESLIVSSNELKLVQSVNDQLNCQIRNGKELLSQKENEILEAAKMFSTLHDEKTELQRLVEDLKSKYAGARVILEDQASQILKLSSDKDTQAATLYTRLQISAVNETLFEEKVRELADACEDLDRRSNFKGMESETLKERVNKLEGENGRLRSHLAAYVPAVSALNDCITSLEMQTLAHANPHNYKVLKVKDLTNHKYAESGPQTGEDQNAMATDALPDFQGLQKRISAIEMAVKQMNESFKTKDEMREIQVLKSGISRRHENIQASKYVEQKAKKSVSDVPVAEIEVLPKDIMLDQTSECSYGLTRRGTLENDDQMLELWETANKDGVIGLTVGKVQKMAIAPTGYHQKRATKEPKNKYPSVESLIEKELSVDKLEISRRFTHPHPHPHEDGNKRKILERLDSDAQKLTNLEITVQDLMSKIEITESTRGKDSEYDTVKGQLEATQEAITKLFDANQKLKKNVEEGTLSFAGKSTAESDESGSASRRRVLEQARRGSEKIGRLQFEVQRLQFLLLKLNDEKEGKGKATMDERNSKVLLRDYLYGGGTRRSYQNKKKKAPFCACMQPPTKGD* 1774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1317 1773 Coils Coil 934 954 - -
Gso19g1317 1773 Coils Coil 1610 1630 - -
Gso19g1317 1773 Coils Coil 262 422 - -
Gso19g1317 1773 Coils Coil 1086 1106 - -
Gso19g1317 1773 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Gso19g1317 1773 Coils Coil 465 485 - -
Gso19g1317 1773 Coils Coil 1644 1664 - -
Gso19g1317 1773 Coils Coil 1163 1197 - -
Gso19g1317 1773 Coils Coil 706 726 - -
Gso19g1317 1773 Coils Coil 1219 1239 - -
Gso19g1317 1773 Coils Coil 584 632 - -
Gso19g1317 1773 Coils Coil 507 576 - -
Gso19g1317 1773 Coils Coil 430 450 - -
Gso19g1317 1773 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Gso19g1317 1773 Coils Coil 1114 1134 - -
Gso19g1317 1773 Coils Coil 227 247 - -
Gso19g1317 1773 Gene3D - 224 393 - -
Gso19g1317 1773 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1290 1773 - -
Gso19g1317 1773 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1292 - -
Gso19g1317 1773 Coils Coil 1023 1078 - -
Gso19g1317 1773 Coils Coil 654 698 - -
Gso19g1317 1773 Coils Coil 811 856 - -
Gso19g1317 1773 PANTHER PROTEIN NETWORKED 4A 1 1292 - -
Gso19g1317 1773 PANTHER PROTEIN NETWORKED 4A 1290 1773 - -
Gso19g1317 1773 SUPERFAMILY Tropomyosin 397 642 - -
Gso19g1317 1773 Coils Coil 1335 1355 - -
Gso19g1317 1773 Coils Coil 1247 1267 - -
Gso19g1317 1773 MobiDBLite consensus disorder prediction 1673 1692 - -
Gso19g1317 1773 Coils Coil 741 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1317 Gso-Chr19 41865203 41872323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1317 - - gmx:100787384 3361.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1317 19 41865203 41872323 Gso3g1318 3 39036128 39043643 GST
Gso19g1317 19 41865203 41872323 Gso2g1202 2 14992602 15000907 PCT
Gso19g1317 19 41865203 41872323 Gso10g0251 10 2583470 2592581 PCT
Gso2g1202 2 14992602 15000907 Gso19g1317 19 41865203 41872323 PCT
Gso10g0251 10 2583470 2592581 Gso19g1317 19 41865203 41872323 PCT