Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1316 ATGATGAGCAGTTTCACACCATGTGCAAACATCATTACAGGAAGCACTAATAATGGTTTAGTGCCACCAAGTACTTGTTGTGATTCATTAAGGTCTTTGATGAGCACTAATATGGATTGTGCTTGCTTGGTTATCTCAGCCAATGCTCCATTTTTCCAACAACCCATTAGCCAAGCTCTTGCCCTCTCCCTCTCACAAGCATGCAGCATTAATGGAGTTCCTTTACAGTGCAAAGCTTCTGGTTCTCCTTTACCAGTTCCAGATATATTCAATGCCTGGAGAGGATCCAAATCCCATCATCACTCTCTTTCACGCACAGCGTCACCCCTTCCCCGTTCACGCGACTGCTTCTCCTAG 357 0.451 MMSSFTPCANIITGSTNNGLVPPSTCCDSLRSLMSTNMDCACLVISANAPFFQQPISQALALSLSQACSINGVPLQCKASGSPLPVPDIFNAWRGSKSHHHSLSRTASPLPRSRDCFS* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1316 118 MobiDBLite consensus disorder prediction 99 118 - -
Gso3g1316 118 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 2 76 IPR036312 -
Gso3g1316 118 PANTHER CLASSICAL ARABINOGALACTAN PROTEIN 9-LIKE 1 98 - -
Gso3g1316 118 CDD AAI_LTSS 5 70 - -
Gso3g1316 118 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 1 98 IPR043325 -
Gso3g1316 118 Pfam Probable lipid transfer 3 77 IPR016140 -
Gso3g1316 118 Gene3D - 1 77 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1316 Gso-Chr3 39000138 39003007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1316 1 91 Lipid Metabolism Gene Families AT2G48140 51.087 6.39e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1316 - - gmx:100802027 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1314 19 41827311 41830604 Gso3g1316 3 39000138 39003007 GST