Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1314 ATGGCTTTTCAAATACGGGTGATACTAGCAACCCTTATAGTGGCTTCAGTAAATTTGGTTTATGGTCAAGTTAGCACGTCCTGCACAACATCTATGATGAGCAGTTTCACACCATGTGCAAACATCATTACAGGAAGCACTAATAATGGTTTAGTGCCACCAAGTACGTGTTGTGATTTATTAAGGTCTTTGATGAGCACTAATATGGATTGTGCTTGCATGGTTATCTCTGCCAATGCTCCATTTTTCCAACAACCCCTTAGCCAAGCTCTTGCCCTCTCCCTTTCACAAGCATGCAACATTAATGGAGTTCCTTTACAGTGCAAAGCTTCTGGTTCCCCTTTACTAGTTCCAGGCCCTGCAGTTCTTGGACCGAACAGCCCAACTCTCCCTTCAATTGCTACATCACCCTTAAGCCCACAAGATTCAAGAATGGTGGCTATGGGCAAAGCACAGAAATATGAAAATATGCAATTGGCACGGGAACTGTCACCAGCATCATCACCAGTGGAAGCAGAAACGCCCACAAGAACTAGAATTCCACAAATCCGACCAGTGTTGACTCCACGTCCTTCAGCATCTCATTCATCTTTTGCTTCCCCCTCAGCTTTTCCATTCTTCATAGGAATCCTGGTTTTTGGCATCTATTAG 651 0.4409 MAFQIRVILATLIVASVNLVYGQVSTSCTTSMMSSFTPCANIITGSTNNGLVPPSTCCDLLRSLMSTNMDCACMVISANAPFFQQPLSQALALSLSQACNINGVPLQCKASGSPLLVPGPAVLGPNSPTLPSIATSPLSPQDSRMVAMGKAQKYENMQLARELSPASSPVEAETPTRTRIPQIRPVLTPRPSASHSSFASPSAFPFFIGILVFGIY* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1314 216 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 7 213 IPR043325 -
Gso19g1314 216 PANTHER CLASSICAL ARABINOGALACTAN PROTEIN 9-LIKE 7 213 - -
Gso19g1314 216 CDD AAI_LTSS 36 101 - -
Gso19g1314 216 Pfam Probable lipid transfer 22 108 IPR016140 -
Gso19g1314 216 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Gso19g1314 216 SMART aai_6 28 108 IPR016140 -
Gso19g1314 216 MobiDBLite consensus disorder prediction 162 196 - -
Gso19g1314 216 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 32 107 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1314 Gso-Chr19 41827311 41830604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1314 23 119 Lipid Metabolism Gene Families AT2G48140 49.485 5.24e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1314 - - gmx:100786841 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1314 19 41827311 41830604 Gso3g1316 3 39000138 39003007 GST