Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1307 ATGAAGGAGTTTCCTTCTTGTTTTGGAGAAAATGGTGTTCGGGTTGTAGATTCCTCCTATTCAAGCACCACAAGGGGAGCACAAAATGCTGTTACTTGTGTCTATCAGTGCAAGTTAGGAGGTCGTTCATGCTTGATCACTGTCTCTTGGACCAAAAATTTGATGGGACAAGGCTTGAGTGTGGGAATAGATGAATTAGGCAATCATTGCCTCTGCAAAGTTGACATAAAGCCATGGTTGTTCTCAAAAAGGAAAGGGTCAAAGAATTTGGAGGTTGAGTCTAATAAAATTGATATACTTTGGGACTTGAGCTGTGCTAAATTTGGTTCTGGGCCAGAACCATTGGAGGGTTTTTACTTAGTTGTTGTGTTCAATCAAGAGATGGTGTTACTCCTAGGGGATCTGAAAAAGGAGGCATGCAAGAAGATTGATAGTGACTATGCTTGTGCTGATCACTCTGAAGCCGTTTTTATTGCAAAGAGAGAGCACATTTTTGGCAAGAAGTTTTATGGTGCAAAGGCTCAGTTTTGTGACAAGGGTCAGGTGCATGATGTGAGGATTGAGTGTGACACACTAGGGCTTAATGATCCATGTCTTGTGATTAGAATTGATAGCAAGACAGTGATGCAGGTGAAGCAACTCAAGTGGAAGTTTAGGGGAAATCACACCATTTTGGTGGATGGAATACCCGTGGAAGTGTTTTGGGATGTACATAATTGGCTATTTGGAAATGCTATGGGAGATGCAGTTTTTATGTTCCAAACTTGCATTTCAACTGAGAAGCTGTGGTCAAGTAGCCAATCATCTGTTTCTGATCCTTCTGTTCTCACATGGGCTTATTCTCAGCAGTTCAGGGATTCACAGTTGCAAGGTAAAGAACATCTCCAAAGAAGGAAACTTAAATTTGGTGGATATCCCCCTTCTTTCGTGTACAAATTGTGA 942 0.414 MKEFPSCFGENGVRVVDSSYSSTTRGAQNAVTCVYQCKLGGRSCLITVSWTKNLMGQGLSVGIDELGNHCLCKVDIKPWLFSKRKGSKNLEVESNKIDILWDLSCAKFGSGPEPLEGFYLVVVFNQEMVLLLGDLKKEACKKIDSDYACADHSEAVFIAKREHIFGKKFYGAKAQFCDKGQVHDVRIECDTLGLNDPCLVIRIDSKTVMQVKQLKWKFRGNHTILVDGIPVEVFWDVHNWLFGNAMGDAVFMFQTCISTEKLWSSSQSSVSDPSVLTWAYSQQFRDSQLQGKEHLQRRKLKFGGYPPSFVYKL* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1307 313 Pfam Plant protein of unknown function (DUF868) 27 285 IPR008586 -
Gso3g1307 313 PANTHER EXPRESSED PROTEIN 1 290 IPR008586 -
Gso3g1307 313 PANTHER PLANT/T24G3-80 PROTEIN 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1307 Gso-Chr3 38907345 38910332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1307 1 274 EF-hand Containing Proteins AT5G28150 62.319 4.80e-117 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1307 - - gmx:100799355 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1307 19 41740304 41741964 Gso3g1307 3 38907345 38910332 GST
Gso3g1307 3 38907345 38910332 Gso2g1215 2 15152590 15154313 PCT
Gso3g1307 3 38907345 38910332 Gso10g0237 10 2462885 2464255 PCT
Gso2g1215 2 15152590 15154313 Gso3g1307 3 38907345 38910332 PCT
Gso10g0237 10 2462885 2464255 Gso3g1307 3 38907345 38910332 PCT