Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1307 ATGAAGGAGTTTCCTTCTTGTTTTGGAGAAAATGGTGTTCAGGTAGTAGATTCCTCCTATTCAAGCACCACAAGGGGAGCTCAAAATGCTGTTACTTGTGTATATCAGTGTAAGTTAGGAGGCCGTTCATGCTTGATCACTGTCTCTTGGACCAAAAATTTGATGGGACAAGGCTTGAGTGTGGGAATAGATGAGTTGGGCAATCATTGCCTCTGCAAGGTTGACATAAAGCCGTGGCTGTTCTCAAAAAGGAAAGGGTCAAAGAATTTGGAGGTTGAGTCTAATAAAATTGATATACTTTGGGACTTGAGCTGTGCTAAATTTGGCTCCGGGCCAGAACCGTTGGAGGGTTTTTACTTAGTTGTTGTGTTCAATCAAGAGATGGTCTTACTCCTAGGGGATCTGACAAAGGAGGCATGCAAGAAGATTGACAGTGACTATGCTTGTGCTCACTCTGAAGCCGTTTTTATTGCAAAGAGAGAGCACATTTTTGGCAAGAAGTTTTATGGTGCAAAGGCTCAGTTTTATGACAAAGGCCAGGTGCATGATGTGAGAATTGAGTGTGACACACTAGGGCTTAATGATCCATGTCTTGTGATTAGAATTGATAGGAAGACAGTGATGCAGGTGAAGCAACTCAAGTGGAAGTTTAGGGGCAATCACACCATCGTGGTGGATGGAATATCCGTGGAAGTGTTTTGGGATGTACATAATTGGCTCTTTGGAAATGCTATGGGAAATGCAGTTTTTATGTTCCAAACTTGCATTTCAACTGAGAAGCTGTGGTCAAGCCAATCTGTTTCTGATCCTTCTGTTCCCACATGGGCTTATTCTCAGCAGTTCAGGGATTCCCAGTTGCAAGGTCTTGGATTCTCTCTCATTTTGTATGCTTGGAAAAATGAGTAG 906 0.4272 MKEFPSCFGENGVQVVDSSYSSTTRGAQNAVTCVYQCKLGGRSCLITVSWTKNLMGQGLSVGIDELGNHCLCKVDIKPWLFSKRKGSKNLEVESNKIDILWDLSCAKFGSGPEPLEGFYLVVVFNQEMVLLLGDLTKEACKKIDSDYACAHSEAVFIAKREHIFGKKFYGAKAQFYDKGQVHDVRIECDTLGLNDPCLVIRIDRKTVMQVKQLKWKFRGNHTIVVDGISVEVFWDVHNWLFGNAMGNAVFMFQTCISTEKLWSSQSVSDPSVPTWAYSQQFRDSQLQGLGFSLILYAWKNE* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1307 301 PANTHER PLANT/T24G3-80 PROTEIN 1 300 - -
Gso19g1307 301 Pfam Plant protein of unknown function (DUF868) 27 299 IPR008586 -
Gso19g1307 301 PANTHER EXPRESSED PROTEIN 1 300 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1307 Gso-Chr19 41740304 41741964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1307 1 301 EF-hand Containing Proteins AT5G28150 61.386 8.55e-125 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1307 - - gmx:100786850 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1307 19 41740304 41741964 Gso3g1307 3 38907345 38910332 GST
Gso19g1307 19 41740304 41741964 Gso2g1215 2 15152590 15154313 PCT
Gso19g1307 19 41740304 41741964 Gso10g0237 10 2462885 2464255 PCT
Gso2g1215 2 15152590 15154313 Gso19g1307 19 41740304 41741964 PCT
Gso10g0237 10 2462885 2464255 Gso19g1307 19 41740304 41741964 PCT