Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1305 ATGGATTCCCATTCCCCTGTCATCCCCTCAACGACGTCCTTGTCAATGGCGGCGAAGCGTCCGTGTCCGTCGCAAAACCCTAGAGCGGAGAACAACCTGGGCGAGGTGGAGCGCCGACTTGAGGCGTTCCTCTCACTCTCCCACGTGGCTTCTCTCTCCCTCGATCTCTCCTTCGAGAGGCTCCTCCAATCGCTCCCCTCCGACTCCGACTCCGATCTCATCGATCGCGCCCTCAAAATGGCCTCTCTCCTCCTAGACGCCGCCAAACACTCATCCCGCAAACGCGCTTCCAACCACAATTCCCTCTCCTGGCCCCTCCCCCCCGACCTCACCATCAAGGTGTTCTCGATGCTTGATACCCAGAGCCTGTGCTATGCTTCGGCTACTTGTTTACTGTTTAGCAAATGTGCTAAGGATCCTATGTGCTATGCAAATCTTGATTTGACGACACTGGTTCCGAAGGTTAACAATGCAGTAGTTGCCACGATGATTCAGCGAGCTGGAAAGGGACTAAGGTCTCTTAAGCTTGGTGTTGTCCCTAGCGCTGCTACTTCACTTGGATCTTGTCCACCATTCGTTTGTACCATCAGAAATGCTATTGTAGAAGTACCTAATTTTTCATGGAATGACAAGAGATCTCGACAAGGGAGAGAGTCATCCATTCTCACAAGATGCTGTTTAAGCCCTTTAAGTGGGGATGGCGGTGCCCCAGGGGCTCTTTTGAGAAAGTTGCACTTGTACAATATCGAGAGAATGGATAATGCATCCCTTGGTGCAGCATTGTCAGCATGCCCTTCTCTCCTTGATTTGGAAATTGTTGGGCTCCATGTTGAGCTGAGGCAAACATTAATGTCAGTAAGTGCAAACTGCCACTTGATAGAGCGTTTGTTTTTTGAGTCTTCTAAAACAGGTAGAGATGACAGCTTGAAAGCGCAAACCTGTTTTGAGCTAGTAAACAATTGTCCTCATCTAACTTCTTTATCCCTTAGAGGGTTTAAGCTACACGATTGCAAAGTTCGTGTACTGGTTAAGGGATTTAGGAAACTGAAATATGTTGACTTTTCAACATCCTATTCAATCACTGGTAACTTCTTAAGAAACCTTGGAAGCTGCAATGGTGGGAATTTACTTGAGGTCTTAATTTTAAGGGATTGCATGCATCTCAAAGAGATGGAAGTTGCTAGGCTGTTGACTGCAATTCTTGCAGGAGATTTCAAATTGCTTGTACATCTTGACATATCCAATAGGGAAGGCTTAGCATCTGAGGCTGACTGGTATCACAGGTGCTATAACTCTAGTATTATGCCTACGAAACAGGTTTTGGAAGCAAGGCCTGATATGTGTCTGGTGGCTGAATATCCGTCAGCCGAAGGAAGTTACATTGAGACATTTGATGCTGATATGAATAGTGAGATAAGTCTTCCATCACAATTGAGCAGCCACACGTCAGATGGATCAATTTTTATGAGTACATCTGAAAGCAGCTACAATAGTGATCAGGGAAGTGGCAATGAGGATGGTCAAGATGCCAACTATGTGATATATGAGGAAAGCTCAGATGAGATTGACTTTTTGTCCCTCTAG 1584 0.4628 MDSHSPVIPSTTSLSMAAKRPCPSQNPRAENNLGEVERRLEAFLSLSHVASLSLDLSFERLLQSLPSDSDSDLIDRALKMASLLLDAAKHSSRKRASNHNSLSWPLPPDLTIKVFSMLDTQSLCYASATCLLFSKCAKDPMCYANLDLTTLVPKVNNAVVATMIQRAGKGLRSLKLGVVPSAATSLGSCPPFVCTIRNAIVEVPNFSWNDKRSRQGRESSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDNASLGAALSACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLFFESSKTGRDDSLKAQTCFELVNNCPHLTSLSLRGFKLHDCKVRVLVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNLLEVLILRDCMHLKEMEVARLLTAILAGDFKLLVHLDISNREGLASEADWYHRCYNSSIMPTKQVLEARPDMCLVAEYPSAEGSYIETFDADMNSEISLPSQLSSHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDEIDFLSL* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1305 527 MobiDBLite consensus disorder prediction 489 508 - -
Gso3g1305 527 Gene3D Ribonuclease Inhibitor 97 398 IPR032675 -
Gso3g1305 527 MobiDBLite consensus disorder prediction 489 507 - -
Gso3g1305 527 MobiDBLite consensus disorder prediction 1 31 - -
Gso3g1305 527 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 35 470 - -
Gso3g1305 527 SUPERFAMILY F-box domain 94 151 IPR036047 GO:0005515
Gso3g1305 527 SUPERFAMILY RNI-like 236 418 - -
Gso3g1305 527 PANTHER F-BOX SKIP17-LIKE PROTEIN 35 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1305 Gso-Chr3 38895736 38903437 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1305 K10268 - gmx:100306182 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1306 19 41721063 41728989 Gso3g1305 3 38895736 38903437 GST